RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 TPBGQ13641 420 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 LARS2Q15031 903 aaKnown RBP23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 FAM160A2Q8N612 972 aaPredicted RBP23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 OR2A1Q8NGT9 310 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 BMFQ96LC9 184 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 OR2A14Q96R47 310 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 BARHL1Q9BZE3 327 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 ASB4Q9Y574 426 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 PLXND1Q9Y4D7 1925 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 M0R3H8 397 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 WNT4P56705 351 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 SIGLEC14Q08ET2 396 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 PLK5Q496M5 336 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 LAPTM4BQ86VI4 370 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 TOR1AIP2Q8NFQ8 470 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 ASB15Q8WXK1 588 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 LRR1Q96L50 414 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 SLC38A2Q96QD8 506 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 COQ7Q99807 217 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 ARHGDIGQ99819 225 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 V9GYH0 126 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 H0Y8X5 98 aa23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 EMC8O43402 210 aa23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 TRAPPC2P0DI81 140 aa23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 TRAPPC2BP0DI82 140 aa23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 HIST1H1TP22492 207 aaPredicted RBP23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 HOXD12P35452 270 aa23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 MAN2A2P49641 1150 aa23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 DOC2BQ14184 412 aa23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 TRAM2Q15035 370 aa23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 MINDY4Q4G0A6 757 aa23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 RASSF6Q6ZTQ3 369 aa23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 IQCHQ86VS3 1027 aa23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 TMEM145Q8NBT3 493 aa23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 OR6T1Q8NGN1 323 aa23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 TEX47Q8TBZ9 253 aa23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 SLC35B4Q969S0 331 aa23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 INSM2Q96T92 566 aaPredicted RBP23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 C17orf62Q9BQA9 187 aa23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 TEX12Q9BXU0 123 aa23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 GIMAP4Q9NUV9 329 aa23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 ENTPD4Q9Y227 616 aa23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 HS3ST3A1Q9Y663 406 aa23.35■■□□□ 1.33
RUNDC3A-201ENST00000225441 PRAMEF26H0Y7S4 382 aa23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 SEC14L5O43304 696 aa23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 CHRM4P08173 479 aa23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 CSNK2A2P19784 350 aaPredicted RBP23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 NUDT1P36639 197 aa23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 TSPAN31Q12999 210 aa23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 NFATC4Q14934 902 aa23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 CEBPEQ15744 281 aa23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 SLC27A4Q6P1M0 643 aa23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 XKRXQ6PP77 449 aa23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 ZNF793Q6ZN11 406 aa23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 UBQLNLQ8IYU4 475 aa23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 OR8H2Q8N162 312 aa23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 GDPD1Q8N9F7 314 aa23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 OR2L5Q8NG80 312 aa23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 AP3S1Q92572 193 aa23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 MS4A6EQ96DS6 147 aa23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 C12orf66Q96MD2 445 aa23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 TXNL4BQ9NX01 149 aaKnown RBP23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 SLC13A4Q9UKG4 626 aa23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 FBXW2Q9UKT8 454 aa23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 TBC1D24Q9ULP9 559 aa23.34■■□□□ 1.33
RUNDC3A-201ENST00000225441 K7ESF4 209 aa23.33■■□□□ 1.33
RUNDC3A-201ENST00000225441 PDGFBP01127 241 aaPredicted RBP23.33■■□□□ 1.33
RUNDC3A-201ENST00000225441 SLC9A3P48764 834 aa23.33■■□□□ 1.33
RUNDC3A-201ENST00000225441 GAS1P54826 345 aa23.33■■□□□ 1.33
RUNDC3A-201ENST00000225441 SCN1BQ07699 218 aa23.33■■□□□ 1.33
RUNDC3A-201ENST00000225441 SLAMF1Q13291 335 aa23.33■■□□□ 1.33
RUNDC3A-201ENST00000225441 SNAPC1Q16533 368 aa23.33■■□□□ 1.33
RUNDC3A-201ENST00000225441 ACSM5Q6NUN0 579 aa23.33■■□□□ 1.33
RUNDC3A-201ENST00000225441 ABHD17CQ6PCB6 329 aa23.33■■□□□ 1.33
RUNDC3A-201ENST00000225441 ADCK2Q7Z695 626 aa23.33■■□□□ 1.33
RUNDC3A-201ENST00000225441 OR5D16Q8NGK9 328 aa23.33■■□□□ 1.33
RUNDC3A-201ENST00000225441 KCTD7Q96MP8 289 aa23.33■■□□□ 1.33
RUNDC3A-201ENST00000225441 WFDC6Q9BQY6 131 aa23.33■■□□□ 1.33
RUNDC3A-201ENST00000225441 SRRQ9GZT4 340 aa23.33■■□□□ 1.33
RUNDC3A-201ENST00000225441 MRPS30Q9NP92 439 aaKnown RBP23.33■■□□□ 1.33
RUNDC3A-201ENST00000225441 PRDM7Q9NQW5 492 aa23.33■■□□□ 1.33
RUNDC3A-201ENST00000225441 TM7SF3Q9NS93 570 aa23.33■■□□□ 1.33
RUNDC3A-201ENST00000225441 SNTG1Q9NSN8 517 aa23.33■■□□□ 1.33
RUNDC3A-201ENST00000225441 MED17Q9NVC6 651 aa23.33■■□□□ 1.33
RUNDC3A-201ENST00000225441 CAB39Q9Y376 341 aaPredicted RBP23.33■■□□□ 1.33
RUNDC3A-201ENST00000225441 IGKV1-8A0A0C4DH67 115 aa23.33■■□□□ 1.32
RUNDC3A-201ENST00000225441 GSAPA4D1B5 854 aa23.33■■□□□ 1.32
RUNDC3A-201ENST00000225441 KDM4EB2RXH2 506 aaPredicted RBP23.33■■□□□ 1.32
RUNDC3A-201ENST00000225441 RGS5O15539 181 aa23.33■■□□□ 1.32
RUNDC3A-201ENST00000225441 SLC34A2O95436 690 aa23.33■■□□□ 1.32
RUNDC3A-201ENST00000225441 EPPINO95925 133 aa23.33■■□□□ 1.32
RUNDC3A-201ENST00000225441 TSPAN19P0C672 248 aa23.33■■□□□ 1.32
RUNDC3A-201ENST00000225441 RPS5P46782 204 aaKnown RBP23.33■■□□□ 1.32
RUNDC3A-201ENST00000225441 OR2B6P58173 313 aa23.33■■□□□ 1.32
RUNDC3A-201ENST00000225441 TGM3Q08188 693 aa23.33■■□□□ 1.32
RUNDC3A-201ENST00000225441 AMER3Q8N944 861 aa23.33■■□□□ 1.32
RUNDC3A-201ENST00000225441 EDAQ92838 391 aa23.33■■□□□ 1.32
RUNDC3A-201ENST00000225441 RFKQ969G6 155 aa23.33■■□□□ 1.32
RUNDC3A-201ENST00000225441 SCARF2Q96GP6 870 aaPredicted RBP23.33■■□□□ 1.32
RUNDC3A-201ENST00000225441 LYARQ9NX58 379 aaKnown RBP23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms