RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 PGBD5Q8N414 524 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 HDDC3Q8N4P3 179 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 NATD1Q8N6N6 113 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 COX18Q8N8Q8 333 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 TMIEQ8NEW7 156 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 OR8K3Q8NH51 312 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 GNPDA2Q8TDQ7 276 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 CCDC107Q8WV48 283 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 RGMAQ96B86 450 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 TESCQ96BS2 214 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 SGTBQ96EQ0 304 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 TMEM185BQ9H7F4 350 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 CNIH4Q9P003 139 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 CKLFQ9UBR5 152 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 CCL26Q9Y258 94 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 ZNF670-ZNF695F2Z2N8 137 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 ATP6V1G2-DDX39BF2Z307 99 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 TMEM189-UBE2V1I3L0A0 370 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 TRIM3O75382 744 aaPredicted RBP10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 SLC16A8O95907 504 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 MSL3P1P0C860 447 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 STK19P49842 368 aaPredicted RBP10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 DUSP6Q16828 381 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 PLEKHS1Q5SXH7 462 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 OTUD1Q5VV17 481 aaPredicted RBP10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 PYHIN1Q6K0P9 492 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 RPTNQ6XPR3 784 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 ZNF852Q6ZMS4 543 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 ZNF627Q7L945 461 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 OR10G6Q8NH81 332 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.92□□□□□ -0.663e-7■■□□□ 12.6
DNMT3B-201ENST00000201963 FCAMRQ8WWV6 532 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 RNF31Q96EP0 1072 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 BHLHE41Q9C0J9 482 aaPredicted RBP10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 NT5DC2Q9H857 520 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 POLHQ9Y253 713 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 KIAA1217Q5T5P2 1943 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 ELOA3DA6NLF2 546 aaPredicted RBP10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 F5H0A9 414 aaPredicted RBP10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 POLR1CO15160 346 aaPredicted RBP10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 SCN2BO60939 215 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 SPDEFO95238 335 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 GASTP01350 101 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 PVALBP20472 110 aaPredicted RBP10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 SLC19A1P41440 591 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 CTBP2P56545 445 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 POU6F2P78424 691 aaPredicted RBP10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 COL9A2Q14055 689 aaPredicted RBP10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 ELOA3BQ3SY89 546 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 ZMAT1Q5H9K5 638 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 SIGIRRQ6IA17 410 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 PARM1Q6UWI2 310 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 GDPD4Q6W3E5 623 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 C3P1Q6ZMU1 363 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 GAREM2Q75VX8 874 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 PARGQ86W56 976 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 TMEM17Q86X19 198 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 ELOA3Q8NG57 546 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 RLN3Q8WXF3 142 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 RDH14Q9HBH5 336 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 SPHK2Q9NRA0 654 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 KCNN3Q9UGI6 736 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 KLHL21Q9UJP4 597 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 PLEKHA6Q9Y2H5 1048 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 CSNK1G3Q9Y6M4 447 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 DOCK5Q9H7D0 1870 aa10.92□□□□□ -0.66
DNMT3B-201ENST00000201963 GPX5O75715 221 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 POP7O75817 140 aaKnown RBP10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 IL9P15248 144 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 CD9P21926 228 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 GUCA1AP43080 201 aaPredicted RBP10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 MNX1P50219 401 aaPredicted RBP10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 DBPQ10586 325 aaPredicted RBP10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 RAB41Q5JT25 222 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 TMEM69Q5SWH9 247 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 CFAP77Q6ZQR2 320 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 GALNTL5Q7Z4T8 443 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 CCDC116Q8IYX3 515 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 BOLLQ8N9W6 283 aaKnown RBP10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 KCT2Q8NC54 265 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 OR5P2Q8WZ92 322 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 CHFRQ96EP1 664 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 MAP6Q96JE9 813 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 RLIMQ9NVW2 624 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 NCDNQ9UBB6 729 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 MUTYHQ9UIF7 546 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 LRRC72A6NJI9 287 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 GTPBP1O00178 669 aaKnown RBP10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 RGS9O75916 674 aaPredicted RBP10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 STC2O76061 302 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 SCG5P05408 212 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 PROS1P07225 676 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 C1GALT1C1LP0DN25 315 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 RAB3BP20337 219 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 DDX6P26196 483 aaKnown RBP eCLIP10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 DLX2Q07687 328 aaPredicted RBP10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 SLC5A12Q1EHB4 618 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 ARSIQ5FYB1 569 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 NDUFAF5Q5TEU4 345 aa10.91□□□□□ -0.66
DNMT3B-201ENST00000201963 PLBD1Q6P4A8 553 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms