RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 LIMK1P53667 647 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 ACTR1AP61163 376 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 CHRNEQ04844 493 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 ZNF91Q05481 1191 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 GPR50Q13585 617 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 ZNF542PQ5EBM4 170 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 CLEC12AQ5QGZ9 265 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 ATAT1Q5SQI0 421 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 KIAA1324Q6UXG2 1013 aaKnown RBP12.33□□□□□ -0.44
CTNS-201ENST00000046640 ZER1Q7Z7L7 766 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 AMIGO1Q86WK6 493 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 KRT73Q86Y46 540 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 DTX3Q8N9I9 347 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 IL17RCQ8NAC3 791 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 OR4K5Q8NGD3 323 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 PATE1Q8WXA2 126 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 TMCO6Q96DC7 493 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 TM9SF2Q99805 663 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 OBP2AQ9NY56 170 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 SSR3Q9UNL2 185 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 SPIN1Q9Y657 262 aaPredicted RBP12.33□□□□□ -0.44
CTNS-201ENST00000046640 FABP12A6NFH5 140 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 SCG5P05408 212 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 ZNF888P0CJ79 500 aaPredicted RBP12.32□□□□□ -0.44
CTNS-201ENST00000046640 NTSR1P30989 418 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 GSTM5P46439 218 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 SIM1P81133 766 aaPredicted RBP12.32□□□□□ -0.44
CTNS-201ENST00000046640 DEFB134Q4QY38 66 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 PDZK1Q5T2W1 519 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 TYW3Q6IPR3 259 aaKnown RBP12.32□□□□□ -0.44
CTNS-201ENST00000046640 SLC30A8Q8IWU4 369 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 ASCC1Q8N9N2 400 aaKnown RBP12.32□□□□□ -0.44
CTNS-201ENST00000046640 FLCNQ8NFG4 579 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 OR2L5Q8NG80 312 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 GATAD2BQ8WXI9 593 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 TIMM29Q9BSF4 260 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 TAPBPLQ9BX59 468 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 EGLN3Q9H6Z9 239 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 COMMD3Q9UBI1 195 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 CMAHPQ9Y471 501 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 SDK1Q7Z5N4 2213 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 PLRG1O43660 514 aaKnown RBP12.32□□□□□ -0.44
CTNS-201ENST00000046640 PRKYO43930 277 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 ADAP00813 363 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 TSPAN19P0C672 248 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 DRD2P14416 443 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 PXNP49023 591 aaPredicted RBP12.32□□□□□ -0.44
CTNS-201ENST00000046640 HYAL1Q12794 435 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 CCDC85BQ15834 202 aaPredicted RBP12.32□□□□□ -0.44
CTNS-201ENST00000046640 SLC6A18Q96N87 628 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 CCDC32Q9BV29 185 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 OR2B2Q9GZK3 357 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 RACGAP1Q9H0H5 632 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 NT5DC2Q9H857 520 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 CAPN10Q9HC96 672 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 CNIH4Q9P003 139 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 ZNF624Q9P2J8 865 aaPredicted RBP12.32□□□□□ -0.44
CTNS-201ENST00000046640 A0A1W2PQF6 199 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 GSAPA4D1B5 854 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 SYNDIG1LA6NDD5 238 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 CH25HO95992 272 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 CMPK1P30085 196 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 SDC2P34741 201 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 ETV5P41161 510 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 ETV1P50549 477 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 PSPHP78330 225 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 ALDH6A1Q02252 535 aaKnown RBP12.32□□□□□ -0.44
CTNS-201ENST00000046640 ZIC1Q15915 447 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 SDE2Q6IQ49 451 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 ACSM5Q6NUN0 579 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 ZNF761Q86XN6 746 aaPredicted RBP12.32□□□□□ -0.44
CTNS-201ENST00000046640 NUP43Q8NFH3 380 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 CHAC2Q8WUX2 184 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 SLC9A6Q92581 669 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 SIPA1Q96FS4 1042 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 PLA2G12AQ9BZM1 189 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 C11orf54Q9H0W9 315 aaPredicted RBP12.32□□□□□ -0.44
CTNS-201ENST00000046640 SRMSQ9H3Y6 488 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 ADAM29Q9UKF5 820 aa12.32□□□□□ -0.44
CTNS-201ENST00000046640 ARHGEF17Q96PE2 2063 aaPredicted RBP12.31□□□□□ -0.44
CTNS-201ENST00000046640 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.31□□□□□ -0.44
CTNS-201ENST00000046640 SH3D21A4FU49 640 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 CCDC182A6NF36 153 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 FAAHO00519 579 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 PRICKLE3O43900 615 aaPredicted RBP12.31□□□□□ -0.44
CTNS-201ENST00000046640 PVRP15151 417 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 POLR2CP19387 275 aaPredicted RBP12.31□□□□□ -0.44
CTNS-201ENST00000046640 CSNK2A2P19784 350 aaPredicted RBP12.31□□□□□ -0.44
CTNS-201ENST00000046640 HOXD11P31277 338 aaPredicted RBP12.31□□□□□ -0.44
CTNS-201ENST00000046640 KHKP50053 298 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 RAB25P57735 213 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 ENPP2Q13822 863 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 GINS1Q14691 196 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 LARS2Q15031 903 aaKnown RBP12.31□□□□□ -0.44
CTNS-201ENST00000046640 ZNF311Q5JNZ3 666 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 MTSS1LQ765P7 747 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 OR2M4Q96R27 311 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 OR7D2Q96RA2 312 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 MAN2C1Q9NTJ4 1040 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 TAS2R7Q9NYW3 318 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms