RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Gpbar1Q80SS6 329 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Tmbim1Q8BJZ3 309 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Tigd4Q8BUZ3 513 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Acot7Q91V12 381 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Abhd17aQ99JW1 310 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Tada1Q99LM9 335 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Eral1Q9CZU4 437 aaKnown RBP21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Ppa1Q9D819 289 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Erv3Q9DAX3 200 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Il23aQ9EQ14 196 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 CN725425A0A087WRU1 652 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Clip3B9EHT4 547 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Gm8180E9PXN0 145 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Vmn2r52L7N2B2 852 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Psmc3ipO35047 217 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Dlx2P40764 332 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Hsd17b3P70385 305 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 VldlrP98156 873 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 TfptQ3U1J1 259 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 SpicQ6P3D7 242 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Mtch2Q791V5 303 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Tas2r40Q7TQB8 319 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Agfg2Q80WC7 479 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Atg4dQ8BGV9 474 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Dzank1Q8C008 778 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Ffar2Q8VCK6 330 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Ing3Q8VEK6 421 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Mrgprb5Q91ZB9 322 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Psat1Q99K85 370 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Nuf2Q99P69 463 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Trmt5Q9D0C4 501 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Ulk2Q9QY01 1037 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Trbv21A0A0A6YX06 97 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Zfp969A2ART2 485 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Zfp973A2BE20 318 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 TagapB2RWW0 714 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Defb43Q30KM9 69 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Itih2Q61703 946 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Scn3bQ8BHK2 215 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 UnkQ8BL48 810 aaKnown RBP21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Prpf18Q8BM39 342 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Clec4gQ8BNX1 294 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Lpcat2Q8BYI6 544 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Lin52Q8CD94 116 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 HopxQ8R1H0 73 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 CthQ8VCN5 398 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Zdhhc21Q9D270 265 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 9030624G23RikQ9D308 155 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Olfr44Q9EQB8 314 aa21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Nusap1Q9ERH4 427 aaKnown RBP21.23■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Kmt2bO08550 2713 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Bod1lE9Q6J5 3032 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Greb1Q3UHK3 1954 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Olfr549E9Q542 316 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 H2-AaP01910 256 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Egr1P08046 533 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Mup4P11590 178 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Abcb1aP21447 1276 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 FahP35505 419 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 EvlP70429 414 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Yy2Q3TTC2 378 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 MertkQ60805 994 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Rims3Q80U57 307 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 SnupnQ80W37 358 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Cept1Q8BGS7 416 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Bloc1s5Q8R015 185 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Epm2aip1Q8VEH5 606 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Olfr1512Q8VF72 313 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Yipf2Q99LP8 312 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Nkd1Q99MH6 471 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 MeltfQ9R0R1 738 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 SptbP15508 2128 aa21.22■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Zfp993A2A8V4 313 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Mgl2A9XX86 381 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Olfr59B1ARL3 323 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Coq10aE9Q3H6 259 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 1700080E11RikE9Q9G1 206 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Gm2056J3QQ02 144 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Gm6337K7N6X9 211 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Gm3115L7N285 211 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Asna1O54984 348 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 En1P09065 401 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 B4galnt2Q09199 510 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Acsm3Q3UNX5 580 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Ankrd42Q3V096 527 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 MagixQ4KL35 324 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Szrd1Q6NXN1 152 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Slc35d3Q8BGF8 422 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Tgm6Q8BM11 706 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 PgghgQ8BP56 690 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Kcns3Q8BQZ8 491 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Znf786Q8BV42 777 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Tmem62Q8BXJ9 643 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 EndovQ8C9A2 338 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Mtg1Q8R2R6 326 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Ptgr2Q8VDQ1 351 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Dnase1l1Q9D7J6 314 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Fam96aQ9DCL2 160 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Dapp1Q9QXT1 280 aa21.21■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Smok1Q9QYZ4 484 aa21.21■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms