RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Sez6l2Q4V9Z5 910 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Havcr1Q5QNS5 305 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cachd1Q6PDJ1 1288 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Slc35f1Q8BGK5 408 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Arrb1Q8BWG8 418 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr398Q8VFY0 314 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr45Q8VGM1 311 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Actr6Q9D864 396 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Zswim2Q9D9X6 631 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Spaca1Q9DA48 305 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cylc1A0A1B0GR13 642 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr1032A2ATE5 310 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr1193A2AV13 318 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr74A2BHP6 318 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Dbx2F8VQH7 377 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Dhcr7O88455 471 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 ComtO88587 265 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Il1r2P27931 410 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cdh11P55288 796 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Myadml2Q08AU7 307 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cep76Q0VEJ0 659 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Lrfn1Q2WF71 766 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Adam5Q3TTE0 751 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr1252Q7TQZ2 314 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Fam72aQ8BFZ8 149 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Q8C4P0 716 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Dlgap5Q8K4R9 808 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 C1qtnf3Q9ES30 246 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm21876F6XK35 94 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Rhox2hK7N6P1 191 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Vmn1r169L7N275 304 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ephb6O08644 1014 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Bcl7cO08664 217 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ifi203O35368 408 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Irf1P15314 329 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 VegfbP49766 207 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Tspan5P62080 268 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cxcr4P70658 359 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Nell1Q2VWQ2 810 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 P4ha2Q60716 537 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Kcnk12Q76M80 430 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Slc22a18Q78KK3 406 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Zc3h14Q8BJ05 735 aaKnown RBP9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Tspan9Q8BJU2 239 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ncs1Q8BNY6 190 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ncr1Q8C567 325 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gas2l1Q8JZP9 678 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cd276Q8VE98 316 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Fam3cQ91VU0 227 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Sntg1Q925E1 517 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Dhrs1Q99L04 313 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Plod2Q9R0B9 737 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Igkv5-45A0A0B4J1J1 115 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Mrap2D3Z1Q2 207 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Vmn2r34E9PVI0 852 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Srp54bE9PXC0 504 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Vmn2r41E9Q5C7 852 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Vmn2r40F6W043 852 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Vmn2r37F8VQD3 802 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 4933408B17RikG3X9B4 273 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm19965J3QNY8 723 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Vmn2r36K7N741 852 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Rnf13O54965 381 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Bmp6P20722 510 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 VipP32648 170 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Hmx2P43687 273 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Vipr1P97751 459 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cds1P98191 461 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Uba1Q02053 1058 aaKnown RBP9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 GiprQ0P543 460 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ms4a15Q3UPL6 245 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Snx33Q4VAA7 574 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Fut10Q5F2L2 481 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Zp1Q62005 623 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr1307Q7TQX1 312 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Trmt12Q8BG71 446 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ffar2Q8VCK6 330 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Psg23Q9D2U0 471 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Psg21Q9DAV5 471 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Slco1a4Q9EP96 670 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Clec3aQ9EPW4 196 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Pdzk1Q9JIL4 519 aa9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ndrg2Q9QYG0 371 aaKnown RBP9.77□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr316A0A0N4SVP2 306 aa9.77□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr396-ps1A0A0U1RNF5 211 aa9.77□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Pramef25A2ASI9 494 aa9.77□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Vmn2r90E9PXJ8 863 aa9.77□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 P01670 111 aa9.77□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 P01671 111 aa9.77□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 P01672 111 aa9.77□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cyp21P03940 487 aa9.77□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 S100a11P50543 98 aaKnown RBP9.77□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Pdp1Q3UV70 538 aa9.77□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 AccslQ3UX83 580 aa9.77□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr318Q5NCD7 306 aa9.77□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Laptm4aQ60961 233 aa9.77□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 CmahQ61419 577 aa9.77□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Rab39aQ8BHD0 217 aa9.77□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cldn17Q8BXA6 224 aa9.77□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Rft1Q8C3B8 541 aa9.77□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms