RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Ubfd1Q78JW9 368 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Larp4Q8BWW4 719 aaKnown RBP9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gfm1Q8K0D5 751 aaKnown RBP9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Ctu1Q99J10 420 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 1700029P11RikQ9CQ68 150 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Rtl8cQ9D6I0 112 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Alg2Q9DBE8 415 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Dpy19l1A6X919 746 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm12800B1AUV4 484 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm3685J3QPP2 205 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Tmco2P0C1V4 183 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gstm3P19639 218 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Tead2P48301 445 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Hes5P70120 167 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Scgb1a1Q06318 96 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Garem1Q3UFT3 876 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Eri2Q5BKS4 688 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr384Q7TRX8 312 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Lrrtm4Q80XG9 590 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Itih5Q8BJD1 952 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 MylipQ8BM54 445 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 BtdQ8CIF4 520 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Col23a1Q8K4G2 532 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Slc22a6Q8VC69 545 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Asb8Q91ZT9 288 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Elp5Q99L85 300 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 SardhQ99LB7 919 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Ap1s2Q9DB50 160 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 AfdnQ9QZQ1 1820 aaKnown RBP9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Esp18A8R0V1 91 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vmn1r58G3X9U3 310 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vmn2r54K7N649 806 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Bcl2l11O54918 196 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Nudt19P11930 357 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Rsu1Q01730 277 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Q3USZ8 430 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 SprQ64105 261 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Rcbtb1Q6NXM2 531 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Ctdsp2Q8BX07 270 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Nhlrc2Q8BZW8 725 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 MmaaQ8C7H1 415 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Zbtb8aQ9CWH1 434 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Dbf4Q9QZ41 663 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Hacd4A2AKM2 232 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr741L7N1Y5 311 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 H2-Q10P01898 325 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 GzmcP08882 248 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 EgflamQ4VBE4 1017 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Nsg1Q62092 185 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vangl1Q80Z96 526 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Sall4Q8BX22 1067 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 4921517D22RikQ8CET0 269 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 D2hgdhQ8CIM3 535 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Slc22a22Q8R0S9 554 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cmtm2aQ9DAR1 169 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Chrm3Q9ERZ3 589 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Akr1a1Q9JII6 325 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Jag1Q9QXX0 1218 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 A0A286YCD0 109 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr1247A2AT78 314 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 FpgtG5E8F4 590 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cyp27b1O35084 507 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Irf1P15314 329 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 TaglnP37804 201 aaKnown RBP9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Acvr1bQ61271 505 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Slc22a18Q78KK3 406 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Q80VP5 184 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Tp53inp2Q8CFU8 221 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 St8sia6Q8K4T1 398 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 DcxrQ91X52 244 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gtpbp3Q923K4 492 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Arrdc4A0A0B4J1F4 415 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm16368A0A1Y7VNG9 144 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Rhox2bA2A447 191 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Rhox2cA2AWL9 191 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm3727J3QM54 205 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Spata2lQ8BNN1 426 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cacnb4Q8R0S4 519 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Tor2aQ8R1J9 321 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 TapbplQ8VD31 451 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Atoh8Q99NA2 322 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Ndufs4Q9CXZ1 175 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Brix1Q9DCA5 353 aaKnown RBP9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Klhl1Q9JI74 751 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Myh15E9Q264 1925 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Ighv11-1A0A075B5R6 117 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr613E9PYB4 317 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr381Q5SSP0 311 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Clec7aQ6QLQ4 244 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Adam20Q7M763 760 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Casc3Q8K3W3 698 aaKnown RBP9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Prelid1Q8R107 217 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Glis2Q8VDL9 521 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Abcg5Q99PE8 652 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Maf1Q9D0U6 258 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Pin1Q9QUR7 165 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Fam209A2APA5 170 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 OpcmlG5E8G3 345 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Rab3aP63011 220 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cldn34b4Q3V0X2 211 aa9.66□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms