RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Grin3aA2AIR5 1135 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gm12790B1AUV6 201 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Adam3F8VQ03 822 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 1700014D04RikJ3QMS2 983 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Cldn4O35054 210 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Il6raP22272 460 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Cd9P40240 226 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Lefty2P57785 368 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Rps3P62908 243 aaKnown RBP10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Adra1bP97717 514 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Macrod2Q3UYG8 475 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Bod1Q5SQY2 173 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gm11992Q5SS90 291 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Mtcp1Q60945 107 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Muc19Q6JHY2 733 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Olfr1128Q7TR47 311 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Slitrk5Q810B7 957 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Ptbp3Q8BHD7 523 aaKnown RBP10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Ncs1Q8BNY6 190 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Olfr450Q8VF81 310 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Cox4i2Q91W29 172 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Pot1Q91WC1 640 aaKnown RBP10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Slco1a6Q99J94 670 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Trmt5Q9D0C4 501 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Bco1Q9JJS6 566 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Mageh1Q9NWG9 218 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Prdm14E9Q3T6 561 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Esp34G3UXG0 151 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Cx3cl1O35188 395 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 ChadO55226 358 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Tap2P36371 702 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Hcrtr2P58308 460 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Fam171bQ14CH0 825 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Tmem231Q3U284 315 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 MagixQ4KL35 324 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Rnf215Q5SPX3 379 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Slc23a3Q60850 611 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gnb3Q61011 340 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Sox17Q61473 419 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 TifaQ793I8 184 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Arrdc3Q7TPQ9 414 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Zim1Q8C393 579 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Phospho1Q8R2H9 267 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Olfr516Q8VFZ5 314 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Olfr651Q8VG78 313 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Kdelr2Q9CQM2 212 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Hsbp1Q9CQZ1 76 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 3110001I22RikQ9CZ70 312 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Ms4a4bQ9ES61 226 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Znf518bB2RRE4 1077 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Tex16F6WNY1 1150 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gm21915J3QPM7 133 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gm10338K7N692 204 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Scarb2O35114 478 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Bhlhe40O35185 411 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Cyp1a2P00186 513 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Jmjd7P0C872 316 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Kcnn3P58391 732 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 ElocP83940 112 aaKnown RBP10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 MthfsdQ3URQ7 372 aaKnown RBP10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Rnase12Q5GAM8 145 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 PtprrQ62132 656 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Med26Q7TN02 588 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 PgghgQ8BP56 690 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Sit1Q8C503 180 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Casc3Q8K3W3 698 aaKnown RBP10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Mmgt2Q8R3L0 123 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Slc27a4Q91VE0 643 aaKnown RBP10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Elmod3Q91YP6 381 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Slc41a3Q921R8 488 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Dnajb1Q9QYJ3 340 aaKnown RBP10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Hsf4Q9R0L1 492 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 A0A286YD17 136 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Il20rbE9Q9A6 308 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Rnpepl1G5E872 720 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Slc1a5P51912 553 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 CtseP70269 397 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gls2Q571F8 602 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 GkQ64516 559 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 DgkbQ6NS52 802 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Plekhs1Q8BW88 474 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Katnal1Q8K0T4 488 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Tram1l1Q8QZR0 363 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Olfr116Q923Q6 321 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Cldnd1Q9CQX5 253 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Shmt2Q9CZN7 504 aaKnown RBP10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Phf6Q9D4J7 364 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Necab3Q9D6J4 353 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Tm9sf3Q9ET30 587 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Serinc1Q9QZI8 453 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Cylc1A0A1B0GR13 642 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Olfr1032A2ATE5 310 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Pcsk6F6XJP7 959 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Sbk3P0C5K0 361 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Ubl4aP21126 157 aaKnown RBP10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Rab11bP46638 218 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Cdh11P55288 796 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Rps24P62849 133 aaKnown RBP10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Prrt3Q6PE13 971 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Abhd4Q8VD66 342 aa10.31□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms