RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Fate1Q8CEK7 99 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Vmn1r206Q8R277 312 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Akr1d1Q8VCX1 325 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Olfr1387Q8VFA9 311 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Pnp2Q9D8C9 305 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Hipk2Q9QZR5 1196 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Srpk3Q9Z0G2 565 aa17.68■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Olfr1034A0A1L1ST14 310 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Skint2A7XUX6 400 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gm21904A8HG57 180 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gm21866J3QMH4 180 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Vmn2r102L7N279 857 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Cdk5r2O35926 369 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Btg4O70552 250 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Smpd2O70572 419 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Tgfb1P04202 390 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 AcadmP45952 421 aaKnown RBP17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Ntsr2P70310 416 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 UrodP70697 367 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Hif3aQ0VBL6 662 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Rnf180Q3U827 592 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Spin1Q61142 262 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Sdc3Q64519 442 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Polr2mQ6P6I6 366 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Adam29Q811Q4 763 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Zcchc3Q8BPK2 400 aaKnown RBP17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 FkrpQ8CG64 494 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 SostQ99P68 211 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Timm22Q9CQ85 194 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Chst13D3Z6E3 336 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Olfr592E9PYB3 312 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gm17555F6U8B9 371 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gm4141K9J7H2 306 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Mmp12P34960 473 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Rnf44Q3UHJ8 407 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Krt76Q3UV17 594 aaKnown RBP17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 EndouQ3V188 412 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Cd53Q61451 219 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Tm7sf2Q71KT5 418 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Tas2r104Q7M723 302 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Vangl1Q80Z96 526 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 SynbQ8BI41 618 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Wdr37Q8CBE3 496 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Micu2Q8CD10 432 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Cox10Q8CFY5 443 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Tcf25Q8R3L2 676 aaKnown RBP17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Paip1Q8VE62 400 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Lrrc49Q91YK0 686 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Ssr2Q9CPW5 183 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Zbtb8aQ9CWH1 434 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Trim13Q9CYB0 407 aa17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Ak4Q9WUR9 223 aaKnown RBP17.67■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Frem3Q5H8B9 2123 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Il1r2P27931 410 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Pax7P47239 503 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Lhx1P63006 406 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Rab42Q0PD08 215 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Ankdd1bQ14DN9 521 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gm5113Q3UGK8 141 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Ccdc177Q3UHB8 706 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Zfp974Q3UVF6 752 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Rcbtb1Q6NXM2 531 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 PstkQ8BP74 359 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Wdfy2Q8BUB4 400 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Vmn1r83Q8R287 306 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Cbx7Q8VDS3 158 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Olfr633Q8VF02 312 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Olfr1284Q8VF29 311 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Olfr1417Q8VGJ6 315 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Pbld1Q9DCG6 288 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Myo7aP97479 2215 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Kiaa0100Q5SYL3 2234 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gm28557A0A087WQQ0 336 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Esp22A8R0V4 111 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 CtssO70370 340 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Wnt4P22724 351 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gabra3P26049 492 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Id2P41136 134 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Igfbp3P47878 292 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Nrg2P56974 756 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Sf3b6P59708 125 aaKnown RBP17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Cab39Q06138 341 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Bcl2a1Q07440 172 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Orm1Q60590 207 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Elavl3Q60900 367 aaKnown RBP17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Slc29a2Q61672 456 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Q8C5S3 137 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Ntng1Q8R4G0 539 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Olfr103Q920Y8 313 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gadd45gip1Q9CR59 222 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Cmtm8Q9CZR4 173 aa17.66■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Znf318Q99PP2 2237 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Phox2bO35690 314 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Klrg1O88713 188 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Cers1P27545 350 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Rps25P62852 125 aaKnown RBP17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Cdh10P70408 788 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Map3k8Q07174 467 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Olfr598Q7TRR2 319 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Lrrtm4Q80XG9 590 aa17.65■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms