RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Msr1P30204 458 aaKnown RBP13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Txnl4aP83877 142 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Agbl4Q09LZ8 540 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Phf12Q5SPL2 1003 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Lasp1Q61792 263 aaKnown RBP13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Runx1t1Q61909 577 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Ugt2a2Q6PDD0 528 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Gramd2bQ6PEM6 445 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 S100a15aQ6S5I3 108 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Adgrd1Q80T32 903 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 SetmarQ80UJ9 309 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Rassf6Q80UQ2 353 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Vgll4Q80V24 287 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Pcdh20Q8BIZ0 952 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 EfhbQ8CDU5 853 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Ifnl3Q8CGK6 193 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Hist1h2aaQ8CGP4 129 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Casc3Q8K3W3 698 aaKnown RBP13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 HibchQ8QZS1 385 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Oas3Q8VI93 1138 aaKnown RBP13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 EtfaQ99LC5 333 aaKnown RBP13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Cyp4f3Q99N16 524 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Bcas2Q9D287 225 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Rsph14Q9D3W1 341 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Dkk3Q9QUN9 349 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 DguokQ9QX60 277 aa13.69□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Prune2Q52KR3 3084 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Tnrc6aQ3UHK8 1896 aaKnown RBP13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Tbc1d25A1A5B6 742 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Map7d3A2AEY4 876 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Fbxw15L7N1X6 466 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Gm8897L7N294 181 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Prss12O08762 761 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 AldocP05063 363 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Ctla4P09793 223 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Ranbp1P34022 203 aaKnown RBP13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Nr1h2Q60644 446 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Actr3bQ641P0 418 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 BpiQ67E05 483 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Szrd1Q6NXN1 152 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Klhdc10Q6PAR0 439 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Morn4Q6PGF2 146 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Olfr1045Q7TR80 315 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Amigo2Q80ZD9 519 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 4933430I17RikQ8BHW4 495 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Ppp1r3eQ8BRJ4 279 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Tmem62Q8BXJ9 643 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Coro2aQ8C0P5 524 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Zfp446Q8C9M8 523 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Dcaf12l1Q8CBW4 501 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Cdc73Q8JZM7 531 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Lyrm4Q8K215 91 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 ManbaQ8K2I4 879 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Q8R3C1 574 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 NrmQ8VC65 262 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Olfr350Q8VFP8 312 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Sntb1Q99L88 537 aaKnown RBP13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Ndufb2Q9CPU2 105 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Hrasls5Q9CPX5 270 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Gje1Q9CX92 205 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Fbxl20Q9CZV8 436 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Cdc20Q9JJ66 499 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 PpieQ9QZH3 301 aaKnown RBP13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Mapk11Q9WUI1 364 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Minpp1Q9Z2L6 481 aa13.68□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Igkv12-38A0A0G2JEI7 115 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Gm43518A0A0G2JGB6 165 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 L3mbtl1A2A5N8 826 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Xlr5aA2BI45 236 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Gm3149E9PW52 257 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 SvaE9PX96 165 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Gm21103E9Q2Q1 267 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Gm3476K7N6V0 257 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Gm8362K7N6Y6 257 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Prl8a2O54832 240 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Asna1O54984 348 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 ApoeP08226 311 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Jmjd7P0C872 316 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Adrb2P18762 418 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 LhcgrP30730 700 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Mmp12P34960 473 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Defa8P50706 81 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Faf1P54731 649 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Sirt6P59941 334 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Kpnb1P70168 876 aaKnown RBP13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Ccdc138Q0VF22 680 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Rbbp4Q60972 425 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Fkbp10Q61576 581 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Xlr3cQ61806 226 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Ffar4Q7TMA4 361 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Teddm1aQ810U2 305 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Ccdc50Q810U5 305 aaKnown RBP13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Ino80cQ8BHA0 191 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Rnf122Q8BP31 155 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Peli2Q8BST6 419 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Cpne1Q8C166 536 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Gm9938Q8C3P5 112 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Phf21bQ8C966 487 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Aoc1Q8JZQ5 751 aa13.67□□□□□ -0.22
Ercc1-201ENSMUST00000003645 Vmn1r217Q8R270 298 aa13.67□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms