RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 PIK3R3Q92569 461 aa7.88□□□□□ -1.15
SGMS1-211ENST00000626236 CDS1Q92903 461 aa7.88□□□□□ -1.15
SGMS1-211ENST00000626236 ADIPOR1Q96A54 375 aa7.88□□□□□ -1.15
SGMS1-211ENST00000626236 LCORQ96JN0 433 aaPredicted RBP7.88□□□□□ -1.15
SGMS1-211ENST00000626236 BTBD9Q96Q07 612 aa7.88□□□□□ -1.15
SGMS1-211ENST00000626236 OR7D2Q96RA2 312 aa7.88□□□□□ -1.15
SGMS1-211ENST00000626236 SH3GL1Q99961 368 aa7.88□□□□□ -1.15
SGMS1-211ENST00000626236 HOPXQ9BPY8 73 aaPredicted RBP7.88□□□□□ -1.15
SGMS1-211ENST00000626236 GPATCH1Q9BRR8 931 aaKnown RBP7.88□□□□□ -1.15
SGMS1-211ENST00000626236 LMF2Q9BU23 707 aaKnown RBP7.88□□□□□ -1.15
SGMS1-211ENST00000626236 NXF5Q9H1B4 397 aaKnown RBP7.88□□□□□ -1.15
SGMS1-211ENST00000626236 CDCP1Q9H5V8 836 aa7.88□□□□□ -1.15
SGMS1-211ENST00000626236 NANOGQ9H9S0 305 aa7.88□□□□□ -1.15
SGMS1-211ENST00000626236 Q9N2J8 555 aa7.88□□□□□ -1.15
SGMS1-211ENST00000626236 NDE1Q9NXR1 346 aa7.88□□□□□ -1.15
SGMS1-211ENST00000626236 GPR83Q9NYM4 423 aa7.88□□□□□ -1.15
SGMS1-211ENST00000626236 MYOTQ9UBF9 498 aa7.88□□□□□ -1.15
SGMS1-211ENST00000626236 ZMIZ1Q9ULJ6 1067 aa7.88□□□□□ -1.15
SGMS1-211ENST00000626236 GPR55Q9Y2T6 319 aaPredicted RBP7.88□□□□□ -1.15
SGMS1-211ENST00000626236 L3MBTL1Q9Y468 752 aa7.88□□□□□ -1.15
SGMS1-211ENST00000626236 OR10H1Q9Y4A9 318 aa7.88□□□□□ -1.15
SGMS1-211ENST00000626236 DOCK10Q96BY6 2186 aa7.88□□□□□ -1.15
SGMS1-211ENST00000626236 IGF2RP11717 2491 aa7.88□□□□□ -1.15
SGMS1-211ENST00000626236 APC2O95996 2303 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 CHD8Q9HCK8 2581 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 C15orf38-AP3S2A0A0A6YYH1 394 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 GXYLT2A0PJZ3 443 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 FRG2CA6NGY1 282 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 TTC36A6NLP5 189 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 DUXAA6NLW8 204 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 MAN1A2O60476 641 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 ITGA10O75578 1167 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 OR2J2O76002 312 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 NKX2-2O95096 273 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 CT45A8P0DMV1 189 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 CT45A9P0DMV2 189 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 OR12D1P0DN82 309 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 DRD5P21918 477 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 GABRA3P34903 492 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 MAP3K8P41279 467 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 PPICP45877 212 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 MAN2A2P49641 1150 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 ST13P50502 369 aaKnown RBP7.87□□□□□ -1.15
SGMS1-211ENST00000626236 ANXA11P50995 505 aaKnown RBP7.87□□□□□ -1.15
SGMS1-211ENST00000626236 SLC7A2P52569 658 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 MVDP53602 400 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 NRG3P56975 720 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 DSTNP60981 165 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 PSG6Q00889 435 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 FADDQ13158 208 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 RGNQ15493 299 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 DUSP5Q16690 384 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 MEP1AQ16819 746 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 CT45A2Q5DJT8 189 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 H3F3CQ6NXT2 135 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 C8orf82Q6P1X6 216 aaPredicted RBP7.87□□□□□ -1.15
SGMS1-211ENST00000626236 BORAQ6PGQ7 559 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 CCDC121Q6ZUS5 278 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 GPR155Q7Z3F1 870 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 ARPINQ7Z6K5 226 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 RPS19BP1Q86WX3 136 aaKnown RBP7.87□□□□□ -1.15
SGMS1-211ENST00000626236 APLFQ8IW19 511 aaPredicted RBP7.87□□□□□ -1.15
SGMS1-211ENST00000626236 PRR22Q8IZ63 422 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 DEFB107AQ8IZN7 70 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 PGAM4Q8N0Y7 254 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 TAGAPQ8N103 731 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 LGI4Q8N135 537 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 C10orf111Q8N326 155 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 C17orf47Q8NEP4 570 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 OR4N2Q8NGD1 307 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 OR10A6Q8NH74 314 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 SLC22A8Q8TCC7 542 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 MIPOL1Q8TD10 442 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 APOBEC4Q8WW27 367 aaKnown RBP7.87□□□□□ -1.15
SGMS1-211ENST00000626236 XAGE5Q8WWM1 108 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 HOXB13Q92826 284 aaPredicted RBP7.87□□□□□ -1.15
SGMS1-211ENST00000626236 RAB8BQ92930 207 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 TP53INP1Q96A56 240 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 TMEM125Q96AQ2 219 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 RMND5BQ96G75 393 aaPredicted RBP7.87□□□□□ -1.15
SGMS1-211ENST00000626236 SLC35A4Q96G79 324 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 LMF1Q96S06 567 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 STACQ99469 402 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 ECSITQ9BQ95 431 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 PIGUQ9H490 435 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 PIF1Q9H611 641 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 EXD2Q9NVH0 621 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 CMTM6Q9NX76 183 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 ADA2Q9NZK5 511 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 TEKT2Q9UIF3 430 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 CBLCQ9ULV8 474 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 PCDHGB3Q9Y5G1 929 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 KCNE3Q9Y6H6 103 aa7.87□□□□□ -1.15
SGMS1-211ENST00000626236 LOC400499M0QZD8 3231 aa7.86□□□□□ -1.15
SGMS1-211ENST00000626236 URB1O60287 2271 aaKnown RBP7.86□□□□□ -1.15
SGMS1-211ENST00000626236 MED13Q9UHV7 2174 aa7.86□□□□□ -1.15
SGMS1-211ENST00000626236 A8MVJ9 347 aa7.86□□□□□ -1.15
SGMS1-211ENST00000626236 HMGN4O00479 90 aa7.86□□□□□ -1.15
SGMS1-211ENST00000626236 ACOX3O15254 700 aa7.86□□□□□ -1.15
SGMS1-211ENST00000626236 GYG2O15488 501 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms