RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 ZFP3Q96NJ6 502 aa9.99□□□□□ -0.81
DDX41-218ENST00000625286 FRG2BQ96QU4 278 aa9.99□□□□□ -0.81
DDX41-218ENST00000625286 NAPGQ99747 312 aaPredicted RBP9.99□□□□□ -0.81
DDX41-218ENST00000625286 PIP5K1AQ99755 562 aa9.99□□□□□ -0.81
DDX41-218ENST00000625286 RTN4RQ9BZR6 473 aa9.99□□□□□ -0.81
DDX41-218ENST00000625286 OPN3Q9H1Y3 402 aaPredicted RBP9.99□□□□□ -0.81
DDX41-218ENST00000625286 PIGMQ9H3S5 423 aa9.99□□□□□ -0.81
DDX41-218ENST00000625286 KLRF1Q9NZS2 232 aa9.99□□□□□ -0.81
DDX41-218ENST00000625286 ADAM29Q9UKF5 820 aa9.99□□□□□ -0.81
DDX41-218ENST00000625286 PCTPQ9UKL6 214 aa9.99□□□□□ -0.81
DDX41-218ENST00000625286 PACSIN3Q9UKS6 424 aa9.99□□□□□ -0.81
DDX41-218ENST00000625286 MXRA5Q9NR99 2828 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 CASKO14936 926 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 ACOX3O15254 700 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 SMPD2O60906 423 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 CDH16O75309 829 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 PDYNP01213 254 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 SBK3P0C264 359 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 KRT15P19012 456 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 TSPAN8P19075 237 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 SRD5A2P31213 254 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 MC3RP41968 323 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 PAFAH1B1P43034 410 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 MAPK12P53778 367 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 C2orf54Q08AI8 447 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 CAPRIN1Q14444 709 aaKnown RBP9.98□□□□□ -0.81
DDX41-218ENST00000625286 ACKR1Q16570 336 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 PRSS53Q2L4Q9 553 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 FAM83EQ2M2I3 478 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 ZNF628Q5EBL2 1059 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 ENPP6Q6UWR7 440 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 IFNEQ86WN2 208 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 CCDC25Q86WR0 208 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 P3H2Q8IVL5 708 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 TMEM151AQ8N4L1 468 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 OR4F6Q8NGB9 312 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 OR4N2Q8NGD1 307 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 PIK3IP1Q96FE7 263 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 SLC35A4Q96G79 324 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 COL21A1Q96P44 957 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 ADOQ96SZ5 270 aa9.98□□□□□ -0.81
DDX41-218ENST00000625286 MRPS18CQ9Y3D5 142 aaKnown RBP9.98□□□□□ -0.81
DDX41-218ENST00000625286 TNPO3Q9Y5L0 923 aaKnown RBP9.98□□□□□ -0.81
DDX41-218ENST00000625286 C1orf226A1L170 272 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 FRG2CA6NGY1 282 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 OR6C70A6NIJ9 312 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 INAFM1C9JVW0 142 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 MSTNO14793 375 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 REM1O75628 298 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 SMNDC1O75940 238 aaKnown RBP eCLIP9.97□□□□□ -0.81
DDX41-218ENST00000625286 CHN1P15882 459 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 CSNK2A2P19784 350 aaPredicted RBP9.97□□□□□ -0.81
DDX41-218ENST00000625286 CRYGSP22914 178 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 UGT2B10P36537 528 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 CPOXP36551 454 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 CCNG1P51959 295 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 GAB1Q13480 694 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 TCHHL1Q5QJ38 904 aaPredicted RBP9.97□□□□□ -0.81
DDX41-218ENST00000625286 LETMD1Q6P1Q0 360 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 METTL2BQ6P1Q9 378 aaKnown RBP9.97□□□□□ -0.81
DDX41-218ENST00000625286 PRSS57Q6UWY2 283 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 ZNF550Q7Z398 422 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 YTHDF3Q7Z739 585 aaKnown RBP9.97□□□□□ -0.81
DDX41-218ENST00000625286 GRAMD2AQ8IUY3 354 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 CCDC116Q8IYX3 515 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 KAT2AQ92830 837 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 ATP6V1E2Q96A05 226 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 PERPQ96FX8 193 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 PGM2Q96G03 612 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 VSTM2LQ96N03 204 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 SFXN2Q96NB2 322 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 BTBD9Q96Q07 612 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 HBEGFQ99075 208 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 FLRT3Q9NZU0 649 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 NDRG3Q9UGV2 375 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 SLC12A4Q9UP95 1085 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 EIF3LQ9Y262 564 aaKnown RBP9.97□□□□□ -0.81
DDX41-218ENST00000625286 DLGAP4Q9Y2H0 992 aa9.97□□□□□ -0.81
DDX41-218ENST00000625286 CCDC189A1A4V9 331 aa9.96□□□□□ -0.82
DDX41-218ENST00000625286 GOLGA6L10A6NI86 522 aa9.96□□□□□ -0.82
DDX41-218ENST00000625286 ARHGEF9O43307 516 aa9.96□□□□□ -0.82
DDX41-218ENST00000625286 THBDP07204 575 aa9.96□□□□□ -0.82
DDX41-218ENST00000625286 CHMP24386 653 aa9.96□□□□□ -0.82
DDX41-218ENST00000625286 GRK2P25098 689 aa9.96□□□□□ -0.82
DDX41-218ENST00000625286 DPP4P27487 766 aa9.96□□□□□ -0.82
DDX41-218ENST00000625286 TYK2P29597 1187 aa9.96□□□□□ -0.82
DDX41-218ENST00000625286 STX2P32856 288 aa9.96□□□□□ -0.82
DDX41-218ENST00000625286 DEKP35659 375 aaKnown RBP9.96□□□□□ -0.82
DDX41-218ENST00000625286 CD79BP40259 229 aa9.96□□□□□ -0.82
DDX41-218ENST00000625286 MAGEA12P43365 314 aa9.96□□□□□ -0.82
DDX41-218ENST00000625286 PCYT1AP49585 367 aa9.96□□□□□ -0.82
DDX41-218ENST00000625286 DIO3P55073 304 aa9.96□□□□□ -0.82
DDX41-218ENST00000625286 CDH13P55290 713 aa9.96□□□□□ -0.82
DDX41-218ENST00000625286 RAE1P78406 368 aaKnown RBP9.96□□□□□ -0.82
DDX41-218ENST00000625286 KRTAP1-1Q07627 177 aa9.96□□□□□ -0.82
DDX41-218ENST00000625286 NAB1Q13506 487 aa9.96□□□□□ -0.82
DDX41-218ENST00000625286 GUSBP1Q15486 140 aa9.96□□□□□ -0.82
DDX41-218ENST00000625286 BCL2A1Q16548 175 aa9.96□□□□□ -0.82
DDX41-218ENST00000625286 GGTA1PQ4G0N0 100 aa9.96□□□□□ -0.82
DDX41-218ENST00000625286 ANKRD34AQ69YU3 496 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms