RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 GAL3ST1Q99999 423 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 DNTTIP1Q9H147 329 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 TCF7L1Q9HCS4 588 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 GPC6Q9Y625 555 aaPredicted RBP10.28□□□□□ -0.76
POLR2A-209ENST00000617998 TMEM8BA6NDV4 472 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 FGFBP1Q14512 234 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 NHSL2Q5HYW2 709 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 OR6N2Q8NGY6 317 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 SGTBQ96EQ0 304 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 STRA6Q9BX79 667 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 C1QTNF6Q9BXI9 259 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 DDX28Q9NUL7 540 aaKnown RBP10.28□□□□□ -0.76
POLR2A-209ENST00000617998 SLC22A20A6NK97 555 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 PDYNP01213 254 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 COX4I1P13073 169 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 TSPAN5P62079 268 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 POU4F3Q15319 338 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 PLCZ1Q86YW0 608 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 OR9A2Q8NGT5 310 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 DUSP19Q8WTR2 217 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 LHX9Q9NQ69 397 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 HAO1Q9UJM8 370 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 LINC00854A0A1B0GVQ3 168 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 KHDRBS3O75525 346 aaKnown RBP10.28□□□□□ -0.76
POLR2A-209ENST00000617998 GLCEO94923 617 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 DAP3P51398 398 aaKnown RBP10.28□□□□□ -0.76
POLR2A-209ENST00000617998 DEFA1P59665 94 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 DEFA3P59666 94 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 PSPHP78330 225 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 CLPPQ16740 277 aaPredicted RBP10.28□□□□□ -0.76
POLR2A-209ENST00000617998 SLC16A14Q7RTX9 510 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 MYDGFQ969H8 173 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 CXCL16Q9H2A7 254 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 C2orf42Q9NWW7 574 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 ZNF229Q9UJW7 825 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 ING4Q9UNL4 249 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 SLC35A3Q9Y2D2 325 aa10.28□□□□□ -0.76
POLR2A-209ENST00000617998 ASXL3Q9C0F0 2248 aa10.27□□□□□ -0.76
POLR2A-209ENST00000617998 PLATP00750 562 aa10.27□□□□□ -0.76
POLR2A-209ENST00000617998 PROCP04070 461 aa10.27□□□□□ -0.76
POLR2A-209ENST00000617998 EXOSC7Q15024 291 aaKnown RBP10.27□□□□□ -0.76
POLR2A-209ENST00000617998 SPIN3Q5JUX0 258 aa10.27□□□□□ -0.76
POLR2A-209ENST00000617998 B3GNT9Q6UX72 402 aa10.27□□□□□ -0.76
POLR2A-209ENST00000617998 PAQR9Q6ZVX9 377 aa10.27□□□□□ -0.76
POLR2A-209ENST00000617998 KISS1RQ969F8 398 aaPredicted RBP10.27□□□□□ -0.76
POLR2A-209ENST00000617998 SEC16BQ96JE7 1060 aa10.27□□□□□ -0.76
POLR2A-209ENST00000617998 SGCZQ96LD1 299 aa10.27□□□□□ -0.76
POLR2A-209ENST00000617998 UBQLN4Q9NRR5 601 aa10.27□□□□□ -0.76
POLR2A-209ENST00000617998 PRPF19Q9UMS4 504 aaKnown RBP10.27□□□□□ -0.76
POLR2A-209ENST00000617998 OR51B4Q9Y5P0 310 aa10.27□□□□□ -0.76
POLR2A-209ENST00000617998 CSRP1P21291 193 aaKnown RBP10.27□□□□□ -0.77
POLR2A-209ENST00000617998 NIPAL3Q6P499 406 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 GABRG3Q99928 467 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 PLEK2Q9NYT0 353 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 REV1Q9UBZ9 1251 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 CITO14578 2027 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 PRR19A6NJB7 356 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 ZMPSTE24O75844 475 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 H1F0P07305 194 aaKnown RBP10.27□□□□□ -0.77
POLR2A-209ENST00000617998 SLC35A1P78382 337 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 CRYZQ08257 329 aaKnown RBP10.27□□□□□ -0.77
POLR2A-209ENST00000617998 AFMIDQ63HM1 303 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 ZNF57Q68EA5 555 aaPredicted RBP10.27□□□□□ -0.77
POLR2A-209ENST00000617998 REP15Q6BDI9 236 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 KCTD18Q6PI47 426 aaPredicted RBP10.27□□□□□ -0.77
POLR2A-209ENST00000617998 INTS6Q9UL03 887 aaKnown RBP10.27□□□□□ -0.77
POLR2A-209ENST00000617998 PLLPQ9Y342 182 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 PCDHGA1Q9Y5H4 931 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 DAPL1A0PJW8 107 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 A8MT66 165 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 SLC19A1P41440 591 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 GBX2P52951 348 aaPredicted RBP10.27□□□□□ -0.77
POLR2A-209ENST00000617998 FZD2Q14332 565 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 ZNF750Q32MQ0 723 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 SLC36A2Q495M3 483 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 GALNT5Q7Z7M9 940 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 SLC15A3Q8IY34 581 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 ZNF565Q8N9K5 539 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 SLC35B2Q8TB61 432 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 TJP1Q07157 1748 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 TPRP12270 2363 aaKnown RBP10.27□□□□□ -0.77
POLR2A-209ENST00000617998 PGRMC2O15173 223 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 TGDSO95455 350 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 FAM189A2Q15884 450 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 ZNF570Q96NI8 536 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 C11orf16Q9NQ32 467 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 SLC17A6Q9P2U8 582 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 MKLN1Q9UL63 735 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 KCNS2Q9ULS6 477 aa10.27□□□□□ -0.77
POLR2A-209ENST00000617998 K7EQS6 105 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 TOR1AO14656 332 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 SLC30A4O14863 429 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 LSM1O15116 133 aaKnown RBP10.26□□□□□ -0.77
POLR2A-209ENST00000617998 CREG1O75629 220 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 SCELO95171 688 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 GABRA1P14867 456 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 FMO3P31513 532 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 MEOX1P50221 254 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 DCDC1P59894 354 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 HES1Q14469 280 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms