RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 SOX17Q9H6I2 414 aaPredicted RBP8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 TBC1D29Q9UFV1 150 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 MMACHCQ9Y4U1 282 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 PCDHA9Q9Y5H5 950 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 OR7A17O14581 309 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 CBFA2T3O75081 653 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 KCNK5O95279 499 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 GABRG2P18507 467 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 ZXDBP98169 803 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 CBFBQ13951 182 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 PAGE3Q5JUK9 113 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 YOD1Q5VVQ6 348 aaPredicted RBP8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 ASTLQ6HA08 431 aaPredicted RBP8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 SYCE2Q6PIF2 218 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 PLEKHG7Q6ZR37 379 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 CDH24Q86UP0 819 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 LILRA3Q8N6C8 439 aaPredicted RBP8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 OR6N2Q8NGY6 317 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 RAB2BQ8WUD1 216 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 MAL2Q969L2 176 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 C11orf24Q96F05 449 aaPredicted RBP8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 SLC41A3Q96GZ6 507 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 NT5DC2Q9H857 520 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 TRPV5Q9NQA5 729 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 FAM53CQ9NYF3 392 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 PADI1Q9ULC6 663 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 PEX16Q9Y5Y5 336 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 TMEM14AQ9Y6G1 99 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 A0A1W2PQ72 361 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 TARM1B6A8C7 271 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 NME4O00746 187 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 EIF1AYO14602 144 aaKnown RBP8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 FZD6O60353 706 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 FOXD2O60548 495 aaPredicted RBP8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 MT-ND5P03915 603 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 CTSLP07711 333 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 C7P10643 843 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 UBL4AP11441 157 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 CNR2P34972 360 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 MAGEA8P43361 318 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 GDI2P50395 445 aaKnown RBP8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 GK3PQ14409 553 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 SGCAQ16586 387 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 GPR137CQ8N3F9 429 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 LMNTD1Q8N9Z9 388 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 CCDC74AQ96AQ1 378 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 FAM210AQ96ND0 272 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 WDR77Q9BQA1 342 aaPredicted RBP8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 BTBD2Q9BX70 525 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 PLA2G2FQ9BZM2 168 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 DNAJC27Q9NZQ0 273 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 CBLCQ9ULV8 474 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 PLXNB2O15031 1838 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 H0YAE9 185 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 HMGB3O15347 200 aaKnown RBP8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 FESP07332 822 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 SLC5A2P31639 672 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 OR12D2P58182 307 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 AP3S2P59780 193 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 CSNK1G2P78368 415 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 MXD1Q05195 221 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 UNQ6126/PRO20091Q6UXV3 157 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 Q6ZS52 159 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 USP43Q70EL4 1123 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 PRR22Q8IZ63 422 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 LNX2Q8N448 690 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 KLHL21Q9UJP4 597 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 GNG8Q9UK08 70 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 PCDHGB2Q9Y5G2 931 aa8.9□□□□□ -0.98
CLTCL1-208ENST00000615606 ADAP00813 363 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 CCNOP22674 350 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 MAPK3P27361 379 aaPredicted RBP8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 ARNTP27540 789 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 TGFBR2P37173 567 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 ACTC1P68032 377 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 ACTA1P68133 377 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 RUNDC3AQ59EK9 446 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 ENPP6Q6UWR7 440 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 PSD4Q8NDX1 1056 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 C3orf30Q96M34 536 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 FER1L6-AS2Q96M78 137 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 KCTD7Q96MP8 289 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 ZNF578Q96N58 590 aaPredicted RBP8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 C1QTNF1Q9BXJ1 281 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 COMMD9Q9P000 198 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 DPPA5A6NC42 116 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 AREL1O15033 823 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 NARSO43776 548 aaKnown RBP8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 IDH3BO43837 385 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 SPARCP09486 303 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 CRISP1P54107 249 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 BLMHQ13867 455 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 EXOSC7Q15024 291 aaKnown RBP8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 ZNF423Q2M1K9 1284 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 ZNF283Q8N7M2 679 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 OR5T3Q8NGG3 340 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 IFI44Q8TCB0 444 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 TMEM9BQ9NQ34 198 aa8.9□□□□□ -0.99
CLTCL1-208ENST00000615606 ATAD5Q96QE3 1844 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms