RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 TCTN3Q6NUS6 607 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 XKRXQ6PP77 449 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 GDPGP1Q6ZNW5 385 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 NOXA1Q86UR1 476 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 GDPD1Q8N9F7 314 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 OR6C4Q8NGE1 309 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 APH1BQ8WW43 257 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 SPRYD4Q8WW59 207 aaPredicted RBP6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 NARS2Q96I59 477 aaKnown RBP6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 PITX2Q99697 317 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 C11orf54Q9H0W9 315 aaPredicted RBP6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 MVB12BQ9H7P6 319 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 MARK1Q9P0L2 795 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 I3L521 148 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 GTPBP1O00178 669 aaKnown RBP6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 EMC8O43402 210 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 CDC123O75794 336 aaPredicted RBP6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 GYPBP06028 91 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 POLR2CP19387 275 aaPredicted RBP6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 NDUFV2P19404 249 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 DRD5P21918 477 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 MMP11P24347 488 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 ACVR2AP27037 513 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 ITPKBP27987 946 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 BMP8BP34820 402 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 MMP12P39900 470 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 GNG2P59768 71 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 RHAGQ02094 409 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 LGALS3BPQ08380 585 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 MLLT11Q13015 90 aaPredicted RBP6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 ACSM5Q6NUN0 579 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 ZC3H14Q6PJT7 736 aaKnown RBP6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 SLC39A5Q6ZMH5 540 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 FAM220AQ7Z4H9 259 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 BMP8AQ7Z5Y6 402 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 ADGRD2Q7Z7M1 963 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 LACC1Q8IV20 430 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 NRSN1Q8IZ57 195 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 ACOT4Q8N9L9 421 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 FANK1Q8TC84 345 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 SLC35B4Q969S0 331 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 RFT1Q96AA3 541 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 TM4SF18Q96CE8 201 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 RBM18Q96H35 190 aaKnown RBP6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 VN1R3Q9BXE9 311 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 DPEP2Q9H4A9 486 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 TMEM38AQ9H6F2 299 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 SYNDIG1Q9H7V2 258 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 MED20Q9H944 212 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 THSD1Q9NS62 852 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 NLGN3Q9NZ94 848 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 COQ3Q9NZJ6 369 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 MED31Q9Y3C7 131 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 LOC105369274A0A096LPK9 316 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 IQCMA0A1B0GVH7 501 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 SMLR1H3BR10 107 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 EFCAB14O75071 495 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 CCR2P41597 374 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 CLDN2P57739 230 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 ERVFC1P60507 584 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 RAE1P78406 368 aaKnown RBP6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 SEC23BQ15437 767 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 BAK1Q16611 211 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 TMEM44Q2T9K0 475 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 CCSAPQ6IQ19 270 aaPredicted RBP6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 PGBD2Q6P3X8 592 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 Q6ZNB5 142 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 PHC2Q8IXK0 858 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 OR4N4Q8N0Y3 316 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 DNAJC5GQ8N7S2 189 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 C1orf216Q8TAB5 229 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 C17orf50Q8WW18 174 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 DEDD2Q8WXF8 326 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 PLCXD1Q9NUJ7 323 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 DNMT3BQ9UBC3 853 aaKnown RBP6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 GRXCR1A8MXD5 290 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 ZNF670-ZNF695F2Z2N8 137 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 DSCR3O14972 297 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 RCBTB2O95199 551 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 MT-ND5P03915 603 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 CEBPBP17676 345 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 C4BPBP20851 252 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 EDNRAP25101 427 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 GRPRP30550 384 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 TGFBR2P37173 567 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 ETV5P41161 510 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 SOX2P48431 317 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 ETV1P50549 477 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 RAB28P51157 221 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 ZNF81P51508 661 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 LIM2P55344 173 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 CTBP2P56545 445 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 ZNF234Q14588 700 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 NXNL2Q5VZ03 156 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 C18orf63Q68DL7 685 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 LINC00299Q6ZSB3 139 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 ADIPOR2Q86V24 386 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 PRSS58Q8IYP2 241 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 ZNF655Q8N720 491 aaPredicted RBP6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 YIPF7Q8N8F6 280 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms