RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 LRRC70Q7Z2Q7 622 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 SLC7A5P1Q8MH63 180 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 ACMSDQ8TDX5 336 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 PCNPQ8WW12 178 aaKnown RBP4.31□□□□□ -1.72
LINC00397-202ENST00000606785 FRAT1Q92837 279 aaPredicted RBP4.31□□□□□ -1.72
LINC00397-202ENST00000606785 C8orf76Q96K31 380 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 LRR1Q96L50 414 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 NODALQ96S42 347 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 APOOQ9BUR5 198 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 DGCR6LQ9BY27 220 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 GSDMCQ9BYG8 508 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 VCX3BQ9H321 246 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 LRRC40Q9H9A6 602 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 POLD4Q9HCU8 107 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 IL1RAPQ9NPH3 570 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 B3GAT2Q9NPZ5 323 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 C1orf123Q9NWV4 160 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 MBD2Q9UBB5 411 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 GHRLQ9UBU3 117 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 RSPH14Q9UHP6 348 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.31□□□□□ -1.72
LINC00397-202ENST00000606785 SLC9A8Q9Y2E8 581 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 PYGO1Q9Y3Y4 419 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 ASB3Q9Y575 518 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 AP4B1Q9Y6B7 739 aa4.31□□□□□ -1.72
LINC00397-202ENST00000606785 CCDC7Q96M83 1385 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 PRDM2Q13029 1718 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.3□□□□□ -1.72
LINC00397-202ENST00000606785 MEIOCA2RUB1 952 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 MBLAC1A4D2B0 266 aaPredicted RBP4.3□□□□□ -1.72
LINC00397-202ENST00000606785 ZSCAN5CA6NGD5 496 aaPredicted RBP4.3□□□□□ -1.72
LINC00397-202ENST00000606785 WASHC1A8K0Z3 465 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 PPIAL4DF5H284 164 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 FBP2O00757 339 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 EI24O14681 340 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 POLR3GO15318 223 aaPredicted RBP4.3□□□□□ -1.72
LINC00397-202ENST00000606785 GPRIN2O60269 458 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 DUSP11O75319 330 aaKnown RBP4.3□□□□□ -1.72
LINC00397-202ENST00000606785 MT-ND1P03886 318 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 AOC1P19801 751 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 PSMA2P25787 234 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 PDHA2P29803 388 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 RGS4P49798 205 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 RAG2P55895 527 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 CBX1P83916 185 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 ZNF177Q13360 481 aaPredicted RBP4.3□□□□□ -1.72
LINC00397-202ENST00000606785 KIAA0141Q14154 515 aaPredicted RBP4.3□□□□□ -1.72
LINC00397-202ENST00000606785 SELPLGQ14242 412 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 RCN1Q15293 331 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 ECSCRQ19T08 205 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 KNOP1Q1ED39 458 aaKnown RBP4.3□□□□□ -1.72
LINC00397-202ENST00000606785 MTHFSDQ2M296 383 aaKnown RBP4.3□□□□□ -1.72
LINC00397-202ENST00000606785 ZNF876PQ49A33 203 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 UNC50Q53HI1 259 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 BLOC1S2Q6QNY1 142 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 ATRAIDQ6UW56 229 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 KIF6Q6ZMV9 814 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 PNPT1Q8TCS8 783 aaKnown RBP4.3□□□□□ -1.72
LINC00397-202ENST00000606785 MIPOL1Q8TD10 442 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 DLX4Q92988 240 aaPredicted RBP4.3□□□□□ -1.72
LINC00397-202ENST00000606785 C11orf52Q96A22 123 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 RBM14Q96PK6 669 aaKnown RBP4.3□□□□□ -1.72
LINC00397-202ENST00000606785 F2RL3Q96RI0 385 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 CCT7Q99832 543 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 WDR13Q9H1Z4 485 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 SPHK2Q9NRA0 654 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 FAM114A2Q9NRY5 505 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 KLRF1Q9NZS2 232 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 EIF3KQ9UBQ5 218 aaKnown RBP4.3□□□□□ -1.72
LINC00397-202ENST00000606785 EMCNQ9ULC0 261 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 ICAM5Q9UMF0 924 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 RNF6Q9Y252 685 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 MRPS33Q9Y291 106 aaKnown RBP4.3□□□□□ -1.72
LINC00397-202ENST00000606785 OR10H1Q9Y4A9 318 aa4.3□□□□□ -1.72
LINC00397-202ENST00000606785 PTCH1Q13635 1447 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 PEG3Q9GZU2 1588 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 NPIPA5A0A0B4J1W7 369 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 A0A0J9YVX5 310 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 LRIT2A6NDA9 550 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 ASB14A6NK59 587 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 NPIPA5E9PKD4 350 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 NUDT21O43809 227 aaKnown RBP4.29□□□□□ -1.72
LINC00397-202ENST00000606785 NMT2O60551 498 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 BCAS1O75363 584 aaPredicted RBP4.29□□□□□ -1.72
LINC00397-202ENST00000606785 ZNF254O75437 659 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 TM7SF2O76062 418 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 PAHP00439 452 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 OAS1P00973 400 aaKnown RBP4.29□□□□□ -1.72
LINC00397-202ENST00000606785 CD1DP15813 335 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 PRKACGP22612 351 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 DHPSP49366 369 aaPredicted RBP4.29□□□□□ -1.72
LINC00397-202ENST00000606785 SULT1E1P49888 294 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 FASTKQ14296 549 aaKnown RBP4.29□□□□□ -1.72
LINC00397-202ENST00000606785 EMC2Q15006 297 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 UPP1Q16831 310 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 CAVIN4Q5BKX8 364 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 BEND6Q5SZJ8 279 aaPredicted RBP4.29□□□□□ -1.72
LINC00397-202ENST00000606785 LCLAT1Q6UWP7 414 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 Q7L0L9 218 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 LUZP1Q86V48 1076 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms