RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 TAAR9Q96RI9 348 aa13.39□□□□□ -0.27
ZNF548-212ENST00000602086 FAM117AQ9C073 453 aa13.39□□□□□ -0.27
ZNF548-212ENST00000602086 SLC38A1Q9H2H9 487 aa13.39□□□□□ -0.27
ZNF548-212ENST00000602086 TRIM45Q9H8W5 580 aaPredicted RBP13.39□□□□□ -0.27
ZNF548-212ENST00000602086 ANKRA2Q9H9E1 313 aa13.39□□□□□ -0.27
ZNF548-212ENST00000602086 EQTNQ9NQ60 294 aa13.39□□□□□ -0.27
ZNF548-212ENST00000602086 THSD1Q9NS62 852 aa13.39□□□□□ -0.27
ZNF548-212ENST00000602086 IFT80Q9P2H3 777 aaPredicted RBP13.39□□□□□ -0.27
ZNF548-212ENST00000602086 LOXL2Q9Y4K0 774 aa13.39□□□□□ -0.27
ZNF548-212ENST00000602086 LRRC42Q9Y546 428 aa13.39□□□□□ -0.27
ZNF548-212ENST00000602086 CCDC187A0A096LP49 1063 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 A8MVJ9 347 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 C1QTNF9BB2RNN3 333 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 C17orf105B2RV13 164 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 IGKV3-11P04433 115 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 FABP3P05413 133 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 CHRM4P08173 479 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 C1QTNF9P0C862 333 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 ITGA2P17301 1181 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 TNNI3P19429 210 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 CD247P20963 164 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 PEX2P28328 305 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 AQP1P29972 269 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 KCNJ5P48544 419 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 NOVA1P51513 510 aaKnown RBP13.38□□□□□ -0.27
ZNF548-212ENST00000602086 PSPHP78330 225 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 KCNC4Q03721 635 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 DUSP8Q13202 625 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 EXOSC7Q15024 291 aaKnown RBP13.38□□□□□ -0.27
ZNF548-212ENST00000602086 NSDHLQ15738 373 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 IQCCQ4KMZ1 466 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 RAB11FIP2Q7L804 512 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 ZDHHC21Q8IVQ6 265 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 APOBEC4Q8WW27 367 aaKnown RBP13.38□□□□□ -0.27
ZNF548-212ENST00000602086 GEMIN6Q8WXD5 167 aaKnown RBP13.38□□□□□ -0.27
ZNF548-212ENST00000602086 SLC9A6Q92581 669 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 CDS1Q92903 461 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 SENP5Q96HI0 755 aaPredicted RBP13.38□□□□□ -0.27
ZNF548-212ENST00000602086 SLC46A1Q96NT5 459 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 CTRCQ99895 268 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 YIPF4Q9BSR8 244 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 OSBPL10Q9BXB5 764 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 ZNF350Q9GZX5 532 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 OR10A5Q9H207 317 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 VCXQ9H320 206 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 RUBCNLQ9H714 662 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 EVA1AQ9H8M9 152 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 MTHFD2LQ9H903 347 aaPredicted RBP13.38□□□□□ -0.27
ZNF548-212ENST00000602086 FOLH1BQ9HBA9 442 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 CTSFQ9UBX1 484 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 MKL2Q9ULH7 1088 aa13.38□□□□□ -0.27
ZNF548-212ENST00000602086 PPIEQ9UNP9 301 aaKnown RBP13.38□□□□□ -0.27
ZNF548-212ENST00000602086 MYOCOSA0A1B0GUC4 107 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 OR6C76A6NM76 312 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 SYT5O00445 386 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 CSO75390 466 aaKnown RBP13.37□□□□□ -0.27
ZNF548-212ENST00000602086 H6PDO95479 791 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 DDAH2O95865 285 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 CLPSP04118 112 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 CSRP1P21291 193 aaKnown RBP13.37□□□□□ -0.27
ZNF548-212ENST00000602086 TRHRP34981 398 aaPredicted RBP13.37□□□□□ -0.27
ZNF548-212ENST00000602086 EFNA3P52797 238 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 DCAF7P61962 342 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 POU6F2P78424 691 aaPredicted RBP13.37□□□□□ -0.27
ZNF548-212ENST00000602086 HPCAP84074 193 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 PSG6Q00889 435 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 ZNF155Q12901 538 aaPredicted RBP13.37□□□□□ -0.27
ZNF548-212ENST00000602086 FOXC1Q12948 553 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 GPAT3Q53EU6 434 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 CMPK2Q5EBM0 449 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 MFSD4BQ5TF39 518 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 PPP4R4Q6NUP7 873 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 TMEM205Q6UW68 189 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 VTCN1Q7Z7D3 282 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 AMIGO2Q86SJ2 522 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 GALNT10Q86SR1 603 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 SVOPLQ8N434 492 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 SIMC1Q8NDZ2 872 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 FAM110BQ8TC76 370 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 TSLPQ969D9 159 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 NRBF2Q96F24 287 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 ZNF354BQ96LW1 612 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 COL21A1Q96P44 957 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 ZNF347Q96SE7 839 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 SDF2Q99470 211 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 SPSB2Q99619 263 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 C9orf16Q9BUW7 83 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 PINK1Q9BXM7 581 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 SEC14L3Q9UDX4 400 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 ERVK-19Q9WJR5 959 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 IFT52Q9Y366 437 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 KCNE3Q9Y6H6 103 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 CLCA3PQ9Y6N3 262 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 V9GYQ6 96 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 CHD8Q9HCK8 2581 aa13.37□□□□□ -0.27
ZNF548-212ENST00000602086 CCDC88CQ9P219 2028 aa13.36□□□□□ -0.27
ZNF548-212ENST00000602086 OR2W5A6NFC9 320 aa13.36□□□□□ -0.27
ZNF548-212ENST00000602086 IDSB3KWA1 339 aa13.36□□□□□ -0.27
ZNF548-212ENST00000602086 TPST1O60507 370 aa13.36□□□□□ -0.27
ZNF548-212ENST00000602086 ALOX12BO75342 701 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms