RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 ZNF628Q5EBL2 1059 aa9.56□□□□□ -0.88
LSM4-205ENST00000597776 OR5M10Q6IEU7 315 aa9.56□□□□□ -0.88
LSM4-205ENST00000597776 ENPP6Q6UWR7 440 aa9.56□□□□□ -0.88
LSM4-205ENST00000597776 NPSR1Q6W5P4 371 aa9.56□□□□□ -0.88
LSM4-205ENST00000597776 PLCZ1Q86YW0 608 aa9.56□□□□□ -0.88
LSM4-205ENST00000597776 CTAGE4Q8IX94 777 aa9.56□□□□□ -0.88
LSM4-205ENST00000597776 NOA1Q8NC60 698 aaKnown RBP9.56□□□□□ -0.88
LSM4-205ENST00000597776 IFT81Q8WYA0 676 aa9.56□□□□□ -0.88
LSM4-205ENST00000597776 EXOSC8Q96B26 276 aaKnown RBP9.56□□□□□ -0.88
LSM4-205ENST00000597776 BTBD9Q96Q07 612 aa9.56□□□□□ -0.88
LSM4-205ENST00000597776 ADOQ96SZ5 270 aa9.56□□□□□ -0.88
LSM4-205ENST00000597776 FMO2Q99518 471 aa9.56□□□□□ -0.88
LSM4-205ENST00000597776 YIPF4Q9BSR8 244 aa9.56□□□□□ -0.88
LSM4-205ENST00000597776 SFXN3Q9BWM7 321 aa9.56□□□□□ -0.88
LSM4-205ENST00000597776 C1QTNF3Q9BXJ4 246 aa9.56□□□□□ -0.88
LSM4-205ENST00000597776 ACPTQ9BZG2 426 aa9.56□□□□□ -0.88
LSM4-205ENST00000597776 PLEKHF2Q9H8W4 249 aa9.56□□□□□ -0.88
LSM4-205ENST00000597776 CLCF1Q9UBD9 225 aa9.56□□□□□ -0.88
LSM4-205ENST00000597776 VPS29Q9UBQ0 182 aa9.56□□□□□ -0.88
LSM4-205ENST00000597776 DMGDHQ9UI17 866 aaKnown RBP9.56□□□□□ -0.88
LSM4-205ENST00000597776 EDARQ9UNE0 448 aa9.56□□□□□ -0.88
LSM4-205ENST00000597776 DLGAP4Q9Y2H0 992 aa9.56□□□□□ -0.88
LSM4-205ENST00000597776 GPR55Q9Y2T6 319 aaPredicted RBP9.56□□□□□ -0.88
LSM4-205ENST00000597776 SH3D21A4FU49 640 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 PLOD2O00469 737 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 PCDH7O60245 1069 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 TSPAN2O60636 221 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 URI1O94763 535 aaPredicted RBP9.55□□□□□ -0.88
LSM4-205ENST00000597776 SUPT7LO94864 414 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 RCBTB2O95199 551 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 HRGP04196 525 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 ECHS1P30084 290 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 LHX2P50458 406 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 DCAF7P61962 342 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 TRA2BP62995 288 aaKnown RBP9.55□□□□□ -0.88
LSM4-205ENST00000597776 UNC50Q53HI1 259 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 GPRIN3Q6ZVF9 776 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 CAMKMTQ7Z624 323 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 ADGRE4PQ86SQ3 457 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 WFDC11Q8NEX6 87 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 ZNF675Q8TD23 568 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 WNT2BQ93097 391 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 TMCO6Q96DC7 493 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 SLC35A4Q96G79 324 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 APIPQ96GX9 242 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 VSTM2LQ96N03 204 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 SFXN2Q96NB2 322 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 TMEM237Q96Q45 408 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 TM9SF2Q99805 663 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 EBPLQ9BY08 206 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 FOLH1BQ9HBA9 442 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 NMRK1Q9NWW6 199 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 TMEM216Q9P0N5 145 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 MCM8Q9UJA3 840 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 ZNF180Q9UJW8 692 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 DKKL1Q9UK85 242 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 RPH3AQ9Y2J0 694 aaPredicted RBP9.55□□□□□ -0.88
LSM4-205ENST00000597776 WIF1Q9Y5W5 379 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 MPDZO75970 2070 aa9.55□□□□□ -0.88
LSM4-205ENST00000597776 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 GNG14A0A1W2PPG7 69 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 DLX3O60479 287 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 TNFSF13O75888 250 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 TGM6O95932 706 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 KRT6AP02538 564 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 KRT6BP04259 564 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 SNRPAP09012 282 aaKnown RBP9.54□□□□□ -0.88
LSM4-205ENST00000597776 HSD3B1P14060 373 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 GRK2P25098 689 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 HSD3B2P26439 372 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 IL12BP29460 328 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 SRD5A2P31213 254 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 CPOXP36551 454 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 KRT6CP48668 564 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 GAS1P54826 345 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 CLDN18P56856 261 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 CSTF3Q12996 717 aaKnown RBP9.54□□□□□ -0.88
LSM4-205ENST00000597776 RASA2Q15283 850 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 ERCC6LQ2NKX8 1250 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 ZNF678Q5SXM1 525 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 AAGABQ6PD74 315 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 SCIMPQ6UWF3 145 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 LARP4Q71RC2 724 aaKnown RBP eCLIP9.54□□□□□ -0.887e-6■□□□□ 9
LSM4-205ENST00000597776 GRAMD2AQ8IUY3 354 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 SLC44A2Q8IWA5 706 aaPredicted RBP9.54□□□□□ -0.88
LSM4-205ENST00000597776 OR7G2Q8NG99 324 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 OR4N2Q8NGD1 307 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 C16orf78Q8WTQ4 265 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 EFHD2Q96C19 240 aaPredicted RBP9.54□□□□□ -0.88
LSM4-205ENST00000597776 C16orf45Q96MC5 204 aaPredicted RBP9.54□□□□□ -0.88
LSM4-205ENST00000597776 ZFP3Q96NJ6 502 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 DACH2Q96NX9 599 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 UCN2Q96RP3 112 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 KCNA7Q96RP8 456 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 ZNF382Q96SR6 550 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 SMR3AQ99954 134 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 FLRT3Q9NZU0 649 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 PACSIN3Q9UKS6 424 aa9.54□□□□□ -0.88
LSM4-205ENST00000597776 A0A087WUV0 522 aaPredicted RBP9.53□□□□□ -0.88
LSM4-205ENST00000597776 EXOC1LA0A1B0GW35 172 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms