RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 SFXN2Q96NB2 322 aa12.84□□□□□ -0.35
ERCC1-205ENST00000587888 ZFP3Q96NJ6 502 aa12.84□□□□□ -0.35
ERCC1-205ENST00000587888 PAFAH2Q99487 392 aa12.84□□□□□ -0.35
ERCC1-205ENST00000587888 MRPL46Q9H2W6 279 aaKnown RBP12.84□□□□□ -0.35
ERCC1-205ENST00000587888 PIGMQ9H3S5 423 aa12.84□□□□□ -0.35
ERCC1-205ENST00000587888 NDRG3Q9UGV2 375 aa12.84□□□□□ -0.35
ERCC1-205ENST00000587888 ZNF225Q9UK10 706 aa12.84□□□□□ -0.35
ERCC1-205ENST00000587888 DKKL1Q9UK85 242 aa12.84□□□□□ -0.35
ERCC1-205ENST00000587888 EIF3LQ9Y262 564 aaKnown RBP12.84□□□□□ -0.35
ERCC1-205ENST00000587888 DLGAP4Q9Y2H0 992 aa12.84□□□□□ -0.35
ERCC1-205ENST00000587888 MED12Q93074 2177 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 A0A1W2PPR1 153 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 A8MT66 165 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 A8MXE2 369 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 TRIM49D1C9J1S8 452 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 MANBAO00462 879 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 ZIC3O60481 467 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 BCAS2O75934 225 aaPredicted RBP12.83□□□□□ -0.36
ERCC1-205ENST00000587888 SMNDC1O75940 238 aaKnown RBP eCLIP12.83□□□□□ -0.36
ERCC1-205ENST00000587888 GOSR1O95249 250 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 TGM6O95932 706 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 RPS17P08708 135 aaKnown RBP12.83□□□□□ -0.36
ERCC1-205ENST00000587888 SBK3P0C264 359 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 CHN1P15882 459 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 IL12BP29460 328 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 ADSLP30566 484 aaPredicted RBP12.83□□□□□ -0.36
ERCC1-205ENST00000587888 HSD17B3P37058 310 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 SERPINB9P50453 376 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 LTBQ06643 244 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 ZNF628Q5EBL2 1059 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 LARP4Q71RC2 724 aaKnown RBP eCLIP12.83□□□□□ -0.36
ERCC1-205ENST00000587888 TAOK1Q7L7X3 1001 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 CHMP1BQ7LBR1 199 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 ZNF572Q7Z3I7 529 aaPredicted RBP12.83□□□□□ -0.36
ERCC1-205ENST00000587888 P4HA3Q7Z4N8 544 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 BIVMQ86UB2 503 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 UBQLNLQ8IYU4 475 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 OR9A2Q8NGT5 310 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 C18orf12Q96KH6 178 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 UCN2Q96RP3 112 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 ACBD3Q9H3P7 528 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 CDC42EP4Q9H3Q1 356 aaKnown RBP12.83□□□□□ -0.36
ERCC1-205ENST00000587888 CLCF1Q9UBD9 225 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 TRPS1Q9UHF7 1281 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 PACSIN3Q9UKS6 424 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 WIF1Q9Y5W5 379 aa12.83□□□□□ -0.36
ERCC1-205ENST00000587888 ABCA4P78363 2273 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 GNG14A0A1W2PPG7 69 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 C17orf51A8MQB3 221 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 TSPAN2O60636 221 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 ABCB7O75027 752 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 SUPT7LO94864 414 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 IL3P08700 152 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 INHBBP09529 407 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 CT45A8P0DMV1 189 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 CT45A9P0DMV2 189 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 CHMP24386 653 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 GRK2P25098 689 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 DPP4P27487 766 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 CLDN18P56856 261 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 EEF1A1P68104 462 aaKnown RBP12.82□□□□□ -0.36
ERCC1-205ENST00000587888 CLCQ05315 142 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 BTKQ06187 659 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 FAM27E3Q08E93 113 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 ERCC6LQ2NKX8 1250 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 CT45A2Q5DJT8 189 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 EEF1A1P5Q5VTE0 462 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 SCIMPQ6UWF3 145 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 SLC44A2Q8IWA5 706 aaPredicted RBP12.82□□□□□ -0.36
ERCC1-205ENST00000587888 TMEM151AQ8N4L1 468 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 CNEP1R1Q8N9A8 125 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 OR4N2Q8NGD1 307 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 DCAKDQ8WVC6 231 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 IFT81Q8WYA0 676 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 EFHD2Q96C19 240 aaPredicted RBP12.82□□□□□ -0.36
ERCC1-205ENST00000587888 SLC35A4Q96G79 324 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 WFIKKN1Q96NZ8 548 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 FAM111AQ96PZ2 611 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 ZNF395Q9H8N7 513 aaPredicted RBP12.82□□□□□ -0.36
ERCC1-205ENST00000587888 BEX4Q9NWD9 120 aaPredicted RBP12.82□□□□□ -0.36
ERCC1-205ENST00000587888 C6orf203Q9P0P8 240 aaPredicted RBP12.82□□□□□ -0.36
ERCC1-205ENST00000587888 MCM8Q9UJA3 840 aa12.82□□□□□ -0.36
ERCC1-205ENST00000587888 MRPS18CQ9Y3D5 142 aaKnown RBP12.82□□□□□ -0.36
ERCC1-205ENST00000587888 MTORP42345 2549 aa12.81□□□□□ -0.36
ERCC1-205ENST00000587888 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.81□□□□□ -0.36
ERCC1-205ENST00000587888 A0A1W2PNV4 684 aa12.81□□□□□ -0.36
ERCC1-205ENST00000587888 SCO2O43819 266 aa12.81□□□□□ -0.36
ERCC1-205ENST00000587888 PCDH7O60245 1069 aa12.81□□□□□ -0.36
ERCC1-205ENST00000587888 ULK1O75385 1050 aa12.81□□□□□ -0.36
ERCC1-205ENST00000587888 TNFSF13O75888 250 aa12.81□□□□□ -0.36
ERCC1-205ENST00000587888 KRT6AP02538 564 aa12.81□□□□□ -0.36
ERCC1-205ENST00000587888 KRT6BP04259 564 aa12.81□□□□□ -0.36
ERCC1-205ENST00000587888 ZNF708P17019 499 aa12.81□□□□□ -0.36
ERCC1-205ENST00000587888 KRT6CP48668 564 aa12.81□□□□□ -0.36
ERCC1-205ENST00000587888 PNLIPRP2P54317 469 aa12.81□□□□□ -0.36
ERCC1-205ENST00000587888 RAE1P78406 368 aaKnown RBP12.81□□□□□ -0.36
ERCC1-205ENST00000587888 CKAP4Q07065 602 aaKnown RBP12.81□□□□□ -0.36
ERCC1-205ENST00000587888 EFR3AQ14156 821 aa12.81□□□□□ -0.36
ERCC1-205ENST00000587888 UNC50Q53HI1 259 aa12.81□□□□□ -0.36
ERCC1-205ENST00000587888 SH2D4BQ5SQS7 431 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms