RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 COL21A1Q96P44 957 aa13.79□□□□□ -0.2
PRKCSH-204ENST00000587290 FAIM2Q9BWQ8 316 aa13.79□□□□□ -0.2
PRKCSH-204ENST00000587290 RBM24Q9BX46 236 aaKnown RBP13.79□□□□□ -0.2
PRKCSH-204ENST00000587290 C1QTNF3Q9BXJ4 246 aa13.79□□□□□ -0.2
PRKCSH-204ENST00000587290 CALHM2Q9HA72 323 aa13.79□□□□□ -0.2
PRKCSH-204ENST00000587290 RYDENQ9NUL5 291 aaKnown RBP13.79□□□□□ -0.2
PRKCSH-204ENST00000587290 TAS2R10Q9NYW0 307 aa13.79□□□□□ -0.2
PRKCSH-204ENST00000587290 FETUBQ9UGM5 382 aa13.79□□□□□ -0.2
PRKCSH-204ENST00000587290 FOXD3Q9UJU5 478 aaPredicted RBP13.79□□□□□ -0.2
PRKCSH-204ENST00000587290 GPR55Q9Y2T6 319 aaPredicted RBP13.79□□□□□ -0.2
PRKCSH-204ENST00000587290 TIMM22Q9Y584 194 aa13.79□□□□□ -0.2
PRKCSH-204ENST00000587290 WIF1Q9Y5W5 379 aa13.79□□□□□ -0.2
PRKCSH-204ENST00000587290 HEATR5AQ86XA9 2040 aa13.79□□□□□ -0.2
PRKCSH-204ENST00000587290 GNG14A0A1W2PPG7 69 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 GOLGA8RI6L899 631 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 PLOD2O00469 737 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 TO15178 435 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 DLX3O60479 287 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 ATE1O95260 518 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 RHOXF2BP0C7M4 288 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 CPN1P15169 458 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 HOXB4P17483 251 aaPredicted RBP13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 DRD5P21918 477 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 PEX19P40855 299 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 CPA2P48052 419 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 LHX2P50458 406 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 BTKQ06187 659 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 ZNF678Q5SXM1 525 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 GPRIN3Q6ZVF9 776 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 KIF18BQ86Y91 864 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 PLCZ1Q86YW0 608 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 OR7G2Q8NG99 324 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 CDC26Q8NHZ8 85 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 ZNF675Q8TD23 568 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 ZNF592Q92610 1267 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 VSTM2LQ96N03 204 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 BTBD9Q96Q07 612 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 SMR3AQ99954 134 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 PLEKHF2Q9H8W4 249 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 FOLH1BQ9HBA9 442 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 DLL4Q9NR61 685 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 FLRT3Q9NZU0 649 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 CLCF1Q9UBD9 225 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 PRODH2Q9UF12 536 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 MCM8Q9UJA3 840 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 ZNF180Q9UJW8 692 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 PSME2Q9UL46 239 aa13.78□□□□□ -0.2
PRKCSH-204ENST00000587290 A0A087WUV0 522 aaPredicted RBP13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 EXOC1LA0A1B0GW35 172 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 OR6C70A6NIJ9 312 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 ARID1AO14497 2285 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 SCO2O43819 266 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 TSPAN2O60636 221 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 CDH16O75309 829 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 ERN1O75460 977 aaKnown RBP13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 CBR3O75828 277 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 TGM6O95932 706 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 IL18BPO95998 194 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 RAF1P04049 648 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 HRGP04196 525 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 SNRPAP09012 282 aaKnown RBP13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 HMOX2P30519 316 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 CPOXP36551 454 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 CLDN18P56856 261 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 SORDQ00796 357 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 SNTA1Q13424 505 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 KEAP1Q14145 624 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 RASA2Q15283 850 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 SF3B4Q15427 424 aaKnown RBP eCLIP13.77□□□□□ -0.217e-7■■■■□ 20.7
PRKCSH-204ENST00000587290 SH2D4BQ5SQS7 431 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 Q71RC1 249 aaPredicted RBP13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 LARP4Q71RC2 724 aaKnown RBP eCLIP13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 ADGRE4PQ86SQ3 457 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 UBQLNLQ8IYU4 475 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 MMGT1Q8N4V1 131 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 METTL6Q8TCB7 284 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 C16orf78Q8WTQ4 265 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 SLC35A4Q96G79 324 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 SFXN2Q96NB2 322 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 ALPK1Q96QP1 1244 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 ZNF382Q96SR6 550 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 YIPF4Q9BSR8 244 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 DKKL1Q9UK85 242 aa13.77□□□□□ -0.21
PRKCSH-204ENST00000587290 H0YC42 278 aa13.76□□□□□ -0.21
PRKCSH-204ENST00000587290 RCBTB2O95199 551 aa13.76□□□□□ -0.21
PRKCSH-204ENST00000587290 KRT6AP02538 564 aa13.76□□□□□ -0.21
PRKCSH-204ENST00000587290 KRT6BP04259 564 aa13.76□□□□□ -0.21
PRKCSH-204ENST00000587290 GRK2P25098 689 aa13.76□□□□□ -0.21
PRKCSH-204ENST00000587290 IL12BP29460 328 aa13.76□□□□□ -0.21
PRKCSH-204ENST00000587290 SRD5A2P31213 254 aa13.76□□□□□ -0.21
PRKCSH-204ENST00000587290 TIA1P31483 386 aaKnown RBP eCLIP13.76□□□□□ -0.21
PRKCSH-204ENST00000587290 GCKP35557 465 aa13.76□□□□□ -0.21
PRKCSH-204ENST00000587290 KRT6CP48668 564 aa13.76□□□□□ -0.21
PRKCSH-204ENST00000587290 GAS1P54826 345 aa13.76□□□□□ -0.21
PRKCSH-204ENST00000587290 FOXA1P55317 472 aa13.76□□□□□ -0.21
PRKCSH-204ENST00000587290 TPD52P55327 224 aaPredicted RBP13.76□□□□□ -0.21
PRKCSH-204ENST00000587290 DCAF7P61962 342 aa13.76□□□□□ -0.21
PRKCSH-204ENST00000587290 TRA2BP62995 288 aaKnown RBP13.76□□□□□ -0.21
PRKCSH-204ENST00000587290 ZNF155Q12901 538 aaPredicted RBP13.76□□□□□ -0.21
PRKCSH-204ENST00000587290 CSTF3Q12996 717 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms