RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 RAD51CO43502 376 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 TSPAN2O60636 221 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 SMNDC1O75940 238 aaKnown RBP eCLIP10.73□□□□□ -0.69
BRCA1-225ENST00000586385 CLDN9O95484 217 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 GSTA2P09210 222 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 CT45A8P0DMV1 189 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 CT45A9P0DMV2 189 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 UGT2B10P36537 528 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 MAPK12P53778 367 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 DIO3P55073 304 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 CORO7P57737 925 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 GUCY2DQ02846 1103 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 ACAP2Q15057 778 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 GUSBP1Q15486 140 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 CT45A2Q5DJT8 189 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 TECRLQ5HYJ1 363 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 CCNYL2Q5T2Q4 361 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 ZDHHC24Q6UX98 284 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 PTGR2Q8N8N7 351 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-225ENST00000586385 SPATA3Q8NHX4 192 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 SFXN2Q96NB2 322 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 COL21A1Q96P44 957 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 BTBD9Q96Q07 612 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 CCL19Q99731 98 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 BDH2Q9BUT1 245 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 GSX2Q9BZM3 304 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 ACBD3Q9H3P7 528 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 CPSF2Q9P2I0 782 aaKnown RBP10.73□□□□□ -0.69
BRCA1-225ENST00000586385 PCTPQ9UKL6 214 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 MRPS18CQ9Y3D5 142 aaKnown RBP10.73□□□□□ -0.69
BRCA1-225ENST00000586385 RAI1Q7Z5J4 1906 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-225ENST00000586385 ANK3Q12955 4377 aaKnown RBP10.73□□□□□ -0.69
BRCA1-225ENST00000586385 A0A087X1B8 175 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 CCDC189A1A4V9 331 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 C1orf226A1L170 272 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 ZSCAN12O43309 604 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 ERAL1O75616 437 aaKnown RBP10.72□□□□□ -0.69
BRCA1-225ENST00000586385 KLHL2O95198 593 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 ALDOAP04075 364 aaKnown RBP10.72□□□□□ -0.69
BRCA1-225ENST00000586385 CRHP06850 196 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 THBDP07204 575 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 CSNK2A2P19784 350 aaPredicted RBP10.72□□□□□ -0.69
BRCA1-225ENST00000586385 GRK2P25098 689 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 GCKP35557 465 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 PTH2RP49190 550 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 SUCLG1P53597 346 aaKnown RBP10.72□□□□□ -0.69
BRCA1-225ENST00000586385 EEF1A1P68104 462 aaKnown RBP10.72□□□□□ -0.69
BRCA1-225ENST00000586385 BCL2A1Q16548 175 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 ZNF628Q5EBL2 1059 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 MROH9Q5TGP6 573 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 EEF1A1P5Q5VTE0 462 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 RPS27LQ71UM5 84 aaKnown RBP10.72□□□□□ -0.69
BRCA1-225ENST00000586385 CNEP1R1Q8N9A8 125 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 PGM2Q96G03 612 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 VSTM2LQ96N03 204 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 ADOQ96SZ5 270 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 LRRC1Q9BTT6 524 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 MED18Q9BUE0 208 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 NTMT1Q9BV86 223 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 RTN4RQ9BZR6 473 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 ZNF225Q9UK10 706 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 CFL2Q9Y281 166 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 SAR1BQ9Y6B6 198 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 USF3Q68DE3 2245 aa10.72□□□□□ -0.69
BRCA1-225ENST00000586385 SONP18583 2426 aaKnown RBP10.72□□□□□ -0.69
BRCA1-225ENST00000586385 A0A096LPK6 155 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 FAM187AA6NFU0 413 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 SLC22A20A6NK97 555 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 REM1O75628 298 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 CNOT4O95628 575 aaKnown RBP10.71□□□□□ -0.69
BRCA1-225ENST00000586385 PAX1P15863 534 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 FPR1P21462 350 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 DPP4P27487 766 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 MAGEA4P43358 317 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 SIRPAP78324 504 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 FAM83EQ2M2I3 478 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 SGO1Q5FBB7 561 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 C6orf163Q5TEZ5 329 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 ANKRD34AQ69YU3 496 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 LETMD1Q6P1Q0 360 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 METTL2BQ6P1Q9 378 aaKnown RBP10.71□□□□□ -0.69
BRCA1-225ENST00000586385 AAGABQ6PD74 315 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 C20orf204Q6ZNR8 217 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 RTTNQ86VV8 2226 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 UBQLNLQ8IYU4 475 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 FADS6Q8N9I5 356 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 ZNF610Q8N9Z0 462 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 OR4F6Q8NGB9 312 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 OR4N2Q8NGD1 307 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 FBXO25Q8TCJ0 367 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 ZNF675Q8TD23 568 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 TRPC4APQ8TEL6 797 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 KLHL29Q96CT2 875 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 PHF21BQ96EK2 531 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 ZC3HAV1LQ96H79 300 aaKnown RBP10.71□□□□□ -0.69
BRCA1-225ENST00000586385 FAM111AQ96PZ2 611 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 RNF122Q9H9V4 155 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 ZNF701Q9NV72 531 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-225ENST00000586385 FLRT3Q9NZU0 649 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 DKKL1Q9UK85 242 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms