RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 IKBIPQ70UQ0 350 aa19.59■□□□□ 0.73
PPP4R1-228ENST00000584074 SLC44A2Q8IWA5 706 aaPredicted RBP19.59■□□□□ 0.73
PPP4R1-228ENST00000584074 ULK2Q8IYT8 1036 aa19.59■□□□□ 0.73
PPP4R1-228ENST00000584074 ACBD4Q8NC06 268 aa19.59■□□□□ 0.73
PPP4R1-228ENST00000584074 OR4N2Q8NGD1 307 aa19.59■□□□□ 0.73
PPP4R1-228ENST00000584074 OR1J4Q8NGS1 313 aa19.59■□□□□ 0.73
PPP4R1-228ENST00000584074 TCP10LQ8TDR4 215 aa19.59■□□□□ 0.73
PPP4R1-228ENST00000584074 GFM2Q969S9 779 aaKnown RBP19.59■□□□□ 0.73
PPP4R1-228ENST00000584074 AMDHD1Q96NU7 426 aa19.59■□□□□ 0.73
PPP4R1-228ENST00000584074 ADOQ96SZ5 270 aa19.59■□□□□ 0.73
PPP4R1-228ENST00000584074 TIMP4Q99727 224 aa19.59■□□□□ 0.73
PPP4R1-228ENST00000584074 SPOCK3Q9BQ16 436 aa19.59■□□□□ 0.73
PPP4R1-228ENST00000584074 ENKD1Q9H0I2 346 aa19.59■□□□□ 0.73
PPP4R1-228ENST00000584074 KCNJ16Q9NPI9 418 aa19.59■□□□□ 0.73
PPP4R1-228ENST00000584074 NPDC1Q9NQX5 325 aaPredicted RBP19.59■□□□□ 0.73
PPP4R1-228ENST00000584074 TAS2R9Q9NYW1 312 aa19.59■□□□□ 0.73
PPP4R1-228ENST00000584074 Q9UFV3 132 aa19.59■□□□□ 0.73
PPP4R1-228ENST00000584074 DNAJC15Q9Y5T4 150 aa19.59■□□□□ 0.73
PPP4R1-228ENST00000584074 DNAJC13O75165 2243 aa19.59■□□□□ 0.73
PPP4R1-228ENST00000584074 A0A087WV62 115 aa19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 ZNF500O60304 480 aaPredicted RBP19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 NPHS1O60500 1241 aa19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 TSPAN2O60636 221 aa19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 TOXO94900 526 aa19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 HOXD4P09016 255 aaPredicted RBP19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 ELAVL4P26378 380 aaKnown RBP19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 NTSP30990 170 aa19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 TFF3Q07654 80 aa19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 CRYZQ08257 329 aaKnown RBP19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 SNTA1Q13424 505 aa19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 RFTN2Q52LD8 501 aaPredicted RBP19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 WIPI1Q5MNZ9 446 aaPredicted RBP19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 MEX3BQ6ZN04 569 aaKnown RBP19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 ZCCHC23Q6ZST2 131 aa19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 LURAP1LQ8IV03 231 aa19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 TMCO6Q96DC7 493 aa19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 SLC35A4Q96G79 324 aa19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 STMN4Q9H169 189 aaPredicted RBP19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 SERHLQ9NQF3 203 aa19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 MAPRE3Q9UPY8 281 aa19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 TRAF6Q9Y4K3 522 aa19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 PCDHGB3Q9Y5G1 929 aa19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 NINQ8N4C6 2090 aa19.58■□□□□ 0.72
PPP4R1-228ENST00000584074 CSMD2Q7Z408 3487 aa19.57■□□□□ 0.72
PPP4R1-228ENST00000584074 MYO9AB2RTY4 2548 aa19.57■□□□□ 0.72
PPP4R1-228ENST00000584074 SNPHO15079 494 aa19.57■□□□□ 0.72
PPP4R1-228ENST00000584074 CHEK2O96017 543 aa19.57■□□□□ 0.72
PPP4R1-228ENST00000584074 FGF4P08620 206 aa19.57■□□□□ 0.72
PPP4R1-228ENST00000584074 ZNF155Q12901 538 aaPredicted RBP19.57■□□□□ 0.72
PPP4R1-228ENST00000584074 UGT3A2Q3SY77 523 aa19.57■□□□□ 0.72
PPP4R1-228ENST00000584074 ANKRD26P1Q6NSI1 321 aa19.57■□□□□ 0.72
PPP4R1-228ENST00000584074 RNF165Q6ZSG1 346 aa19.57■□□□□ 0.72
PPP4R1-228ENST00000584074 LARP4Q71RC2 724 aaKnown RBP eCLIP19.57■□□□□ 0.72
PPP4R1-228ENST00000584074 YRDCQ86U90 279 aaKnown RBP19.57■□□□□ 0.72
PPP4R1-228ENST00000584074 DDIASQ8IXT1 998 aa19.57■□□□□ 0.72
PPP4R1-228ENST00000584074 WDSUB1Q8N9V3 476 aa19.57■□□□□ 0.72
PPP4R1-228ENST00000584074 FAM83FQ8NEG4 500 aaPredicted RBP19.57■□□□□ 0.72
PPP4R1-228ENST00000584074 FCRL1Q96LA6 429 aa19.57■□□□□ 0.72
PPP4R1-228ENST00000584074 C19orf53Q9UNZ5 99 aaPredicted RBP19.57■□□□□ 0.72
PPP4R1-228ENST00000584074 OR10H1Q9Y4A9 318 aa19.57■□□□□ 0.72
PPP4R1-228ENST00000584074 EXPH5Q8NEV8 1989 aa19.57■□□□□ 0.72
PPP4R1-228ENST00000584074 KDM4EB2RXH2 506 aaPredicted RBP19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 UPK1AO00322 258 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 PLOD2O00469 737 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 AKAP10O43572 662 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 ABCB7O75027 752 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 COQ9O75208 318 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 NEFHP12036 1026 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 SDC1P18827 310 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 IL12BP29460 328 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 KRT20P35900 424 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 ZFP36L2P47974 494 aaKnown RBP19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 RPL38P63173 70 aaKnown RBP19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 PSG6Q00889 435 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 DCST1Q5T197 706 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 VASNQ6EMK4 673 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 SEM1Q6ZVN7 128 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 LIX1LQ8IVB5 337 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 CLYBLQ8N0X4 340 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 CLHC1Q8NHS4 586 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 AGR3Q8TD06 166 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 TWIST2Q8WVJ9 160 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 EFHD2Q96C19 240 aaPredicted RBP19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 ELP4Q96EB1 424 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 TSSK3Q96PN8 268 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 CCT7Q99832 543 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 TREX2Q9BQ50 279 aaPredicted RBP19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 TMEM109Q9BVC6 243 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 PARD6BQ9BYG5 372 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 DDX18Q9NVP1 670 aaKnown RBP19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 BAIAP2L1Q9UHR4 511 aa19.56■□□□□ 0.72
PPP4R1-228ENST00000584074 PDZD2O15018 2839 aa19.55■□□□□ 0.72
PPP4R1-228ENST00000584074 PIP5K1BO14986 540 aa19.55■□□□□ 0.72
PPP4R1-228ENST00000584074 LSM1O15116 133 aaKnown RBP19.55■□□□□ 0.72
PPP4R1-228ENST00000584074 SLITRK5O94991 958 aa19.55■□□□□ 0.72
PPP4R1-228ENST00000584074 PSMG1O95456 288 aa19.55■□□□□ 0.72
PPP4R1-228ENST00000584074 BMP7P18075 431 aa19.55■□□□□ 0.72
PPP4R1-228ENST00000584074 ARRB2P32121 409 aa19.55■□□□□ 0.72
PPP4R1-228ENST00000584074 PNLIPRP2P54317 469 aa19.55■□□□□ 0.72
PPP4R1-228ENST00000584074 WNT3P56703 355 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms