RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 HMGCS1Q01581 520 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 SNTA1Q13424 505 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 ZNF628Q5EBL2 1059 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 ZNF678Q5SXM1 525 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 TMEM81Q6P7N7 255 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 ENPP6Q6UWR7 440 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 NPSR1Q6W5P4 371 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 PLCZ1Q86YW0 608 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 RELL1Q8IUW5 271 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 OR4N2Q8NGD1 307 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 ZNF592Q92610 1267 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 EFHD2Q96C19 240 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 TMCO6Q96DC7 493 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 APIPQ96GX9 242 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 SFXN2Q96NB2 322 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 TMEM237Q96Q45 408 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 ALPK1Q96QP1 1244 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 G6PC3Q9BUM1 346 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 ACPTQ9BZG2 426 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 NMRK1Q9NWW6 199 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 JKAMPQ9P055 326 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 TMEM216Q9P0N5 145 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 FETUBQ9UGM5 382 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 GPR55Q9Y2T6 319 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 WIF1Q9Y5W5 379 aa10.56□□□□□ -0.72
CDK5RAP3-223ENST00000582114 A0A087WUV0 522 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 EXOC1LA0A1B0GW35 172 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 OR6C70A6NIJ9 312 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 B4DXG7 233 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 PLOD2O00469 737 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 TO15178 435 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 DLX3O60479 287 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 ATE1O95260 518 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 IL18BPO95998 194 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 KRT6AP02538 564 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 KRT6BP04259 564 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 SNRPAP09012 282 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 CTAGE8P0CG41 777 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 CT45A8P0DMV1 189 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 CT45A9P0DMV2 189 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 CPN1P15169 458 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 TAC1P20366 129 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 ECHS1P30084 290 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 KRT20P35900 424 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 KRT6CP48668 564 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 GFRA1P56159 465 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 TRA2BP62995 288 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 SORDQ00796 357 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 RASA2Q15283 850 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 ERCC6LQ2NKX8 1250 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 DEFB113Q30KQ7 82 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 CT45A2Q5DJT8 189 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 SH2D4BQ5SQS7 431 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 GPRIN3Q6ZVF9 776 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 Q71RC1 249 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 LARP4Q71RC2 724 aaKnown RBP eCLIP10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 GRAMD2AQ8IUY3 354 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 SLC44A2Q8IWA5 706 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 CTAGE4Q8IX94 777 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 UBQLNLQ8IYU4 475 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 WFDC11Q8NEX6 87 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 METTL6Q8TCB7 284 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 C16orf78Q8WTQ4 265 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 BTBD9Q96Q07 612 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 KCNA7Q96RP8 456 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 SFXN3Q9BWM7 321 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 C1QTNF3Q9BXJ4 246 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 PLEKHF2Q9H8W4 249 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 FOLH1BQ9HBA9 442 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 SENP1Q9P0U3 644 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 CLCF1Q9UBD9 225 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 MCM8Q9UJA3 840 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 ZNF180Q9UJW8 692 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 EDARQ9UNE0 448 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 TIMM22Q9Y584 194 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 ACANP16112 2415 aa10.55□□□□□ -0.72
CDK5RAP3-223ENST00000582114 A0A1W2PPR1 153 aa10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 SH3D21A4FU49 640 aa10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 GOLGA8RI6L899 631 aa10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 SCO2O43819 266 aa10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 TSPAN2O60636 221 aa10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 ULK1O75385 1050 aa10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 SMNDC1O75940 238 aaKnown RBP eCLIP10.54□□□□□ -0.722e-22■□□□□ 9.5
CDK5RAP3-223ENST00000582114 RCBTB2O95199 551 aa10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 TGM6O95932 706 aa10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 HRGP04196 525 aa10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 HOXB4P17483 251 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 GRK2P25098 689 aa10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 DPP4P27487 766 aa10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 SRD5A2P31213 254 aa10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 ACSM2AQ08AH3 577 aa10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 ZNF155Q12901 538 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 CSTF3Q12996 717 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 STX5Q13190 355 aa10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 WHAMMP3Q1A5X7 153 aa10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 PRSS53Q2L4Q9 553 aa10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 ACSM2BQ68CK6 577 aa10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 AAGABQ6PD74 315 aa10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 P4HA3Q7Z4N8 544 aa10.54□□□□□ -0.72
CDK5RAP3-223ENST00000582114 CAMKMTQ7Z624 323 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms