RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 OR5T3Q8NGG3 340 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 OR52J3Q8NH60 311 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 IFI44Q8TCB0 444 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 GPR151Q8TDV0 419 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 RIT1Q92963 219 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 CCDC74AQ96AQ1 378 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 C16orf58Q96GQ5 468 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 C7orf34Q96L11 122 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 C10orf90Q96M02 699 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 DPYSL5Q9BPU6 564 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 PINK1Q9BXM7 581 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 ALOXE3Q9BYJ1 711 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 NRSN2Q9GZP1 204 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 SPRTNQ9H040 489 aaPredicted RBP8.69□□□□□ -1.02
SS18-220ENST00000582092 GABARAPL1Q9H0R8 117 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 ZNF696Q9H7X3 374 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 MTHFD2LQ9H903 347 aaPredicted RBP8.69□□□□□ -1.02
SS18-220ENST00000582092 SYNPO2LQ9H987 977 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 BCL2L10Q9HD36 194 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 CUTCQ9NTM9 273 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 GIN1Q9NXP7 522 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 UBAP1Q9NZ09 502 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 NDUFAF4Q9P032 175 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 ZMIZ1Q9ULJ6 1067 aa8.69□□□□□ -1.02
SS18-220ENST00000582092 C19orf53Q9UNZ5 99 aaPredicted RBP8.69□□□□□ -1.02
SS18-220ENST00000582092 MAGED1Q9Y5V3 778 aaPredicted RBP8.69□□□□□ -1.02
SS18-220ENST00000582092 URB1O60287 2271 aaKnown RBP8.69□□□□□ -1.02
SS18-220ENST00000582092 CHD8Q9HCK8 2581 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 SNRNP200O75643 2136 aaKnown RBP8.68□□□□□ -1.02
SS18-220ENST00000582092 EME2A4GXA9 379 aaPredicted RBP8.68□□□□□ -1.02
SS18-220ENST00000582092 DPPA5A6NC42 116 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 TRABD2BA6NFA1 517 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 CCDC160A6NGH7 325 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 TMX2-CTNND1H3BSU7 103 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 AP3D1O14617 1153 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 BCKDKO14874 412 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 CASC3O15234 703 aaKnown RBP8.68□□□□□ -1.02
SS18-220ENST00000582092 FGF17O60258 216 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 STX11O75558 287 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 GCM2O75603 506 aaPredicted RBP8.68□□□□□ -1.02
SS18-220ENST00000582092 UGT2B17O75795 530 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 MT-CO3P00414 261 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 H1F0P07305 194 aaKnown RBP8.68□□□□□ -1.02
SS18-220ENST00000582092 CCNYL3P0C7X3 344 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 ATP6V1B1P15313 513 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 TNFRSF1BP20333 461 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 CD247P20963 164 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 IFNGR2P38484 337 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 RPL5P46777 297 aaKnown RBP8.68□□□□□ -1.02
SS18-220ENST00000582092 POU6F2P78424 691 aaPredicted RBP8.68□□□□□ -1.02
SS18-220ENST00000582092 ADARB1P78563 741 aaKnown RBP8.68□□□□□ -1.02
SS18-220ENST00000582092 IL5RAQ01344 420 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 DUSP2Q05923 314 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 TARDBPQ13148 414 aaKnown RBP eCLIP8.68□□□□□ -1.02
SS18-220ENST00000582092 KCNAB2Q13303 367 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 GANABQ14697 944 aaKnown RBP8.68□□□□□ -1.02
SS18-220ENST00000582092 DUSP7Q16829 419 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 EIPR1Q53HC9 387 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 FGD3Q5JSP0 725 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 COLEC12Q5KU26 742 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 DCST1Q5T197 706 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 MFSD12Q6NUT3 480 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 TTLL10Q6ZVT0 673 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 GALNT12Q8IXK2 581 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 OFCC1Q8IZS5 231 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 HS3ST5Q8IZT8 346 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 OR2L13Q8N349 312 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 VWA5B2Q8N398 1253 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 LINC00471Q8N535 108 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 OR10G2Q8NGC3 310 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 OR52P1PQ8NH57 321 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 OR51Q1Q8NH59 317 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 KLHL6Q8WZ60 621 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 FKBP10Q96AY3 582 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 OTUB1Q96FW1 271 aaPredicted RBP8.68□□□□□ -1.02
SS18-220ENST00000582092 SLC35A4Q96G79 324 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 FBXL20Q96IG2 436 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 ZNF578Q96N58 590 aaPredicted RBP8.68□□□□□ -1.02
SS18-220ENST00000582092 AMBRA1Q9C0C7 1298 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 FAM192AQ9GZU8 254 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 PAPOLBQ9NRJ5 636 aaKnown RBP8.68□□□□□ -1.02
SS18-220ENST00000582092 SCN3BQ9NY72 215 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 DKK4Q9UBT3 224 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 POFUT2Q9Y2G5 429 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 WDR45Q9Y484 360 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 GMPPBQ9Y5P6 360 aa8.68□□□□□ -1.02
SS18-220ENST00000582092 GPC6Q9Y625 555 aaPredicted RBP8.68□□□□□ -1.02
SS18-220ENST00000582092 TTC36A6NLP5 189 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 H3BNH8 94 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 TOX3O15405 576 aaPredicted RBP8.67□□□□□ -1.02
SS18-220ENST00000582092 B4GAT1O43505 415 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 PLOD3O60568 738 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 DNAJB6O75190 326 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 JRKO75564 520 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 SMNDC1O75940 238 aaKnown RBP eCLIP8.67□□□□□ -1.02
SS18-220ENST00000582092 IFI6P09912 130 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 GIMD1P0DJR0 217 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 ITGAMP11215 1152 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 IL7RP16871 459 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 FBLP22087 321 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms