RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 SCN2BO60939 215 aa12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 REM1O75628 298 aa12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 SNX4O95219 450 aa12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 CCL3P10147 92 aa12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 MDH1P40925 334 aaKnown RBP12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 MAP3K8P41279 467 aa12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 SNTA1Q13424 505 aa12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 DECR1Q16698 335 aa12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 HYAL4Q2M3T9 481 aa12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 FAM174BQ3ZCQ3 159 aa12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 PRR30Q53SZ7 412 aaPredicted RBP12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 SPANXN4Q5MJ08 99 aa12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 MSANTD1Q6ZTZ1 278 aa12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 MIER2Q8N344 545 aa12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 ST6GALNAC3Q8NDV1 305 aa12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 OR2M7Q8NG81 312 aa12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 TMCO6Q96DC7 493 aa12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 FAM120BQ96EK7 910 aaKnown RBP12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 COL21A1Q96P44 957 aa12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 ZCCHC3Q9NUD5 404 aaKnown RBP12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 MRGBPQ9NV56 204 aa12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 CNOT11Q9UKZ1 510 aaKnown RBP12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 SNX8Q9Y5X2 465 aa12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 DNAJC13O75165 2243 aa12.78□□□□□ -0.36
SNORD3B-1-201ENST00000577988 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 ACOT7O00154 380 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 TSPAN2O60636 221 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 NKX2-2O95096 273 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 WISP1O95388 367 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 CBX6O95503 412 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 PGRP06401 933 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 ALOX5P09917 674 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 TROVE2P10155 538 aaKnown RBP eCLIP12.77□□□□□ -0.372e-26■■■■■ 143.5
SNORD3B-1-201ENST00000577988 ZNF24P17028 368 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 LCN1P31025 176 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 ATP4BP51164 291 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 PRKAG1P54619 331 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 CORO7P57737 925 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 FBXW4P57775 412 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 HBA1P69905 142 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 PHC1P78364 1004 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 ELOAQ14241 798 aaKnown RBP12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 IGFBP7Q16270 282 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 SPDYE7PQ495Y7 208 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 EXOSC6Q5RKV6 272 aaKnown RBP12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 METTL21CQ5VZV1 264 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 TMEM198Q66K66 360 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 MFSD12Q6NUT3 480 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 SLC30A6Q6NXT4 461 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 NPSR1Q6W5P4 371 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 SLC22A16Q86VW1 577 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 OR10G3Q8NGC4 313 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 GOT1L1Q8NHS2 421 aaPredicted RBP12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 DIO2Q92813 273 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 HGDQ93099 445 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 TMBIM1Q969X1 311 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 DTNBP1Q96EV8 351 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 GIMAP5Q96F15 307 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 CCDC115Q96NT0 180 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 STACQ99469 402 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 EBF4Q9BQW3 602 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 ANGPTL4Q9BY76 406 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 ACTRT3Q9BYD9 372 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 RABEP2Q9H5N1 569 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 CXorf36Q9H7Y0 433 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 IL1RL2Q9HB29 575 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 HHATLQ9HCP6 504 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 DUSP22Q9NRW4 184 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 DEPPQ9NTK1 212 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 CBLCQ9ULV8 474 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 BOKQ9UMX3 212 aaPredicted RBP12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 FAF1Q9UNN5 650 aaPredicted RBP12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 TRIM33Q9UPN9 1127 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 PCDHGB3Q9Y5G1 929 aa12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.77□□□□□ -0.37
SNORD3B-1-201ENST00000577988 FAM234BA2RU67 622 aa12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 DUXAA6NLW8 204 aa12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 HS6ST1O60243 411 aa12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 KCNH1O95259 989 aa12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 HMGN2P05204 90 aaKnown RBP12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 VIMP08670 466 aaKnown RBP12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 EFNA1P20827 205 aaPredicted RBP12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 UQCRC2P22695 453 aa12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 IL12AP29459 219 aa12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 IL12BP29460 328 aa12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 GABRA3P34903 492 aa12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 PIGAP37287 484 aa12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 CASP3P42574 277 aa12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 TDGF1P3P51864 188 aa12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 TXNL4AP83876 142 aaKnown RBP12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 FOXO1Q12778 655 aa12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 GAB1Q13480 694 aa12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 TP53BP2Q13625 1128 aa12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 NNATQ16517 81 aa12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.76□□□□□ -0.378e-12■■■■■ 60
SNORD3B-1-201ENST00000577988 CDC73Q6P1J9 531 aa12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 PAOXQ6QHF9 649 aa12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 SZRD1Q7Z422 152 aa12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 PACS2Q86VP3 889 aa12.76□□□□□ -0.37
SNORD3B-1-201ENST00000577988 PRR22Q8IZ63 422 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms