RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 TMCO6Q96DC7 493 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 TSPAN17Q96FV3 270 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 ATOH8Q96SQ7 321 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 ADOQ96SZ5 270 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 RNF122Q9H9V4 155 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 NUDT4Q9NZJ9 180 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 MAT2BQ9NZL9 334 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 ZNF639Q9UID6 485 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 CES1P1Q9UKY3 287 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 CFL2Q9Y281 166 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 RNF11Q9Y3C5 154 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 ZNF337Q9Y3M9 751 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 TSC22D4Q9Y3Q8 395 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 JRKLQ9Y4A0 524 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 ANGPTL3Q9Y5C1 460 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 PCDHGA11Q9Y5H2 935 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 PCNX3Q9H6A9 2034 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 GOLGA6L10A0A0M3HER8 536 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 OR6C70A6NIJ9 312 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 ACOX3O15254 700 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 TP73O15350 636 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 SEC14L5O43304 696 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 GPRIN2O60269 458 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 NDUFS7O75251 213 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 TNFRSF21O75509 655 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 ERAL1O75616 437 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 CBX7O95931 251 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 SOD3P08294 240 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 MTHFD2P13995 350 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 SSTR1P30872 391 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 ACVR1BP36896 505 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 PPICP45877 212 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 EMDP50402 254 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 GAS1P54826 345 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 CLDN20P56880 219 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 GPX6P59796 221 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 RAB10P61026 200 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 RPS4XP62701 263 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 MRPS35P82673 323 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 PON3Q15166 354 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 ZKSCAN8Q15776 578 aaPredicted RBP9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 LILRB1Q8NHL6 650 aaPredicted RBP9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 RAB3IL1Q8TBN0 382 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 COL21A1Q96P44 957 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 OSBPL9Q96SU4 736 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 TMEM204Q9BSN7 226 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 KCNF1Q9H3M0 494 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 DSN1Q9H410 356 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 ANKRA2Q9H9E1 313 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 NSMCE4AQ9NXX6 385 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 PSD3Q9NYI0 1048 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 CLEC4AQ9UMR7 237 aa9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 GPR55Q9Y2T6 319 aaPredicted RBP9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.09□□□□□ -0.95
NPLOC4-220ENST00000576940 ALPK2Q86TB3 2170 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 A8MV72 311 aaPredicted RBP9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 OVOL3O00110 214 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 FOXE1O00358 373 aaPredicted RBP9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 TO15178 435 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 TSPAN2O60636 221 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 TMCC2O75069 709 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 ADAM11O75078 769 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 AQP8O94778 261 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 HK1P19367 917 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 GRK2P25098 689 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 DSCR4P56555 118 aaPredicted RBP9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 EEFSECP57772 596 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 PHEXP78562 749 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 OCRLQ01968 901 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 SLMAPQ14BN4 828 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 GUSBP1Q15486 140 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 LTB4RQ15722 352 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 CTU2Q2VPK5 515 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 KRTAP24-1Q3LI83 254 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 CCNYL2Q5T2Q4 361 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 STAC2Q6ZMT1 411 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 RAPH1Q70E73 1250 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 FAM214BQ7L5A3 538 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 CMC1Q7Z7K0 106 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 ZBED8Q8IZ13 594 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 OR4N2Q8NGD1 307 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 UBTD2Q8WUN7 234 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 NEUROG1Q92886 237 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 CAVIN3Q969G5 261 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 NXNL1Q96CM4 212 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 ZBED6CLQ96FA7 236 aaPredicted RBP9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 TRMT61AQ96FX7 289 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 CDK15Q96Q40 435 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 GPR22Q99680 433 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 RBBP8Q99708 897 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 TRIM31Q9BZY9 425 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 SLCO5A1Q9H2Y9 848 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 IPPKQ9H8X2 491 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 PLSCR4Q9NRQ2 329 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 MED11Q9P086 117 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 PPP2R2CQ9Y2T4 447 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 PCDHA9Q9Y5H5 950 aa9.08□□□□□ -0.96
NPLOC4-220ENST00000576940 E7ESA3 106 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 H3BML4 177 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 KERAO60938 352 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms