RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 TM4SF18Q96CE8 201 aa9.48□□□□□ -0.89
TVP23B-208ENST00000575261 ERP27Q96DN0 273 aa9.48□□□□□ -0.89
TVP23B-208ENST00000575261 SLC35A4Q96G79 324 aa9.48□□□□□ -0.89
TVP23B-208ENST00000575261 C18orf12Q96KH6 178 aa9.48□□□□□ -0.89
TVP23B-208ENST00000575261 ZNF681Q96N22 645 aa9.48□□□□□ -0.89
TVP23B-208ENST00000575261 SFXN2Q96NB2 322 aa9.48□□□□□ -0.89
TVP23B-208ENST00000575261 BTBD9Q96Q07 612 aa9.48□□□□□ -0.89
TVP23B-208ENST00000575261 HBEGFQ99075 208 aa9.48□□□□□ -0.89
TVP23B-208ENST00000575261 PAFAH2Q99487 392 aa9.48□□□□□ -0.89
TVP23B-208ENST00000575261 MRPL57Q9BQC6 102 aaKnown RBP9.48□□□□□ -0.89
TVP23B-208ENST00000575261 G6PC3Q9BUM1 346 aa9.48□□□□□ -0.89
TVP23B-208ENST00000575261 MRPL46Q9H2W6 279 aaKnown RBP9.48□□□□□ -0.89
TVP23B-208ENST00000575261 PFDN4Q9NQP4 134 aa9.48□□□□□ -0.89
TVP23B-208ENST00000575261 ZDHHC18Q9NUE0 388 aa9.48□□□□□ -0.89
TVP23B-208ENST00000575261 NINJ2Q9NZG7 142 aa9.48□□□□□ -0.89
TVP23B-208ENST00000575261 NDRG3Q9UGV2 375 aa9.48□□□□□ -0.89
TVP23B-208ENST00000575261 TRPS1Q9UHF7 1281 aa9.48□□□□□ -0.89
TVP23B-208ENST00000575261 DKKL1Q9UK85 242 aa9.48□□□□□ -0.89
TVP23B-208ENST00000575261 UTS2RQ9UKP6 389 aa9.48□□□□□ -0.89
TVP23B-208ENST00000575261 EIF3LQ9Y262 564 aaKnown RBP9.48□□□□□ -0.89
TVP23B-208ENST00000575261 DLGAP4Q9Y2H0 992 aa9.48□□□□□ -0.89
TVP23B-208ENST00000575261 MED12LQ86YW9 2145 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 A0A1B0GTL3 188 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 A8MXE2 369 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 HCRTR2O43614 444 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 REM1O75628 298 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 BCAS2O75934 225 aaPredicted RBP9.47□□□□□ -0.89
TVP23B-208ENST00000575261 CT45A8P0DMV1 189 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 CT45A9P0DMV2 189 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 HSD3B1P14060 373 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 ZNF708P17019 499 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 HSD3B2P26439 372 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 CLDN18P56856 261 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 SLC7A5Q01650 507 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 LTBQ06643 244 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 ERCC6LQ2NKX8 1250 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 CT45A2Q5DJT8 189 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 ZNF628Q5EBL2 1059 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 SHEQ5VZ18 495 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 OR2A2Q6IF42 318 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 PLXDC2Q6UX71 529 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 RPS27LQ71UM5 84 aaKnown RBP9.47□□□□□ -0.89
TVP23B-208ENST00000575261 P4HA3Q7Z4N8 544 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 KRTAP1-3Q8IUG1 177 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 RELL1Q8IUW5 271 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 SAMD14Q8IZD0 417 aaPredicted RBP9.47□□□□□ -0.89
TVP23B-208ENST00000575261 ADOQ96SZ5 270 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 C1QTNF3Q9BXJ4 246 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 FUT8Q9BYC5 575 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 GIMAP4Q9NUV9 329 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 VPS29Q9UBQ0 182 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 MCM8Q9UJA3 840 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 FBXL2Q9UKC9 423 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 GPR55Q9Y2T6 319 aaPredicted RBP9.47□□□□□ -0.89
TVP23B-208ENST00000575261 MRPS18CQ9Y3D5 142 aaKnown RBP9.47□□□□□ -0.89
TVP23B-208ENST00000575261 TESMINQ9Y4I5 508 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 ZANQ9Y493 2812 aa9.47□□□□□ -0.89
TVP23B-208ENST00000575261 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 A0A1W2PNV4 684 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 GNG14A0A1W2PPG7 69 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 A0A1W2PPR1 153 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 A8MT66 165 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 FAM171A2A8MVW0 826 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 PPP6CO00743 305 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 MSTNO14793 375 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 PCDH7O60245 1069 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 TSPAN2O60636 221 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 TNFSF13O75888 250 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 KRT6AP02538 564 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 KRT6BP04259 564 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 CRHP06850 196 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 IL3P08700 152 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 INHBBP09529 407 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 TSPAN8P19075 237 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 TCEA1P23193 301 aaKnown RBP9.46□□□□□ -0.9
TVP23B-208ENST00000575261 GRK2P25098 689 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 DPP4P27487 766 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 KRT6CP48668 564 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 PCYT1AP49585 367 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 STARP49675 285 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 CDH13P55290 713 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 CORO7P57737 925 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 ETF1P62495 437 aaKnown RBP9.46□□□□□ -0.9
TVP23B-208ENST00000575261 NKX6-1P78426 367 aaPredicted RBP9.46□□□□□ -0.9
TVP23B-208ENST00000575261 MRPS22P82650 360 aaKnown RBP9.46□□□□□ -0.9
TVP23B-208ENST00000575261 CKAP4Q07065 602 aaKnown RBP9.46□□□□□ -0.9
TVP23B-208ENST00000575261 CSTF3Q12996 717 aaKnown RBP9.46□□□□□ -0.9
TVP23B-208ENST00000575261 RASA2Q15283 850 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 BCL2A1Q16548 175 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 UBAP2Q5T6F2 1119 aaKnown RBP9.46□□□□□ -0.9
TVP23B-208ENST00000575261 NPSR1Q6W5P4 371 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 SYT10Q6XYQ8 523 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 LARP4Q71RC2 724 aaKnown RBP eCLIP9.46□□□□□ -0.9
TVP23B-208ENST00000575261 CHMP1BQ7LBR1 199 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 OR4K17Q8NGC6 315 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 OR9A2Q8NGT5 310 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 RNF138Q8WVD3 245 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 EXOSC8Q96B26 276 aaKnown RBP9.46□□□□□ -0.9
TVP23B-208ENST00000575261 VSTM2LQ96N03 204 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 SMR3AQ99954 134 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms