RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ANKFN1Q8N957 763 aa22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 SCNM1Q9BWG6 230 aa22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 ZNF700Q9H0M5 742 aa22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 C5orf58C9J3I9 102 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 CREG1O75629 220 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 LIPCP11150 499 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 VEZF1Q14119 521 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 ATAD3BQ5T9A4 648 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 NPSR1Q6W5P4 371 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 C16orf62Q7Z3J2 963 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 COX18Q8N8Q8 333 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 APCDD1LQ8NCL9 501 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 OR11G2Q8NGC1 345 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 FAM162AQ96A26 154 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 LRGUKQ96M69 825 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 GAL3ST4Q96RP7 486 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 STACQ99469 402 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 GPN2Q9H9Y4 310 aaPredicted RBP22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 DUSP22Q9NRW4 184 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 EXD2Q9NVH0 621 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 ZNF223Q9UK11 482 aaPredicted RBP22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 KCND3Q9UK17 655 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 PPIEQ9UNP9 301 aaKnown RBP22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 GXYLT2A0PJZ3 443 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 TMEM247A6NEH6 219 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 A8MVJ9 347 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 PCDH17O14917 1159 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 NKX2-2O95096 273 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 POLE2P56282 527 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 MYBPC3Q14896 1274 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 REEP3Q6NUK4 255 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 SPATA24Q86W54 205 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 GIN1Q9NXP7 522 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 ANGPT4Q9Y264 503 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 PCDHGA6Q9Y5G7 932 aa22.3■■□□□ 1.16
ATPAF1-213ENST00000574428 PIEZO1Q92508 2521 aa22.29■■□□□ 1.16
ATPAF1-213ENST00000574428 GCM2O75603 506 aaPredicted RBP22.29■■□□□ 1.16
ATPAF1-213ENST00000574428 AGR2O95994 175 aa22.29■■□□□ 1.16
ATPAF1-213ENST00000574428 EBPQ15125 230 aaKnown RBP22.29■■□□□ 1.16
ATPAF1-213ENST00000574428 GPAT3Q53EU6 434 aa22.29■■□□□ 1.16
ATPAF1-213ENST00000574428 LRRC23Q53EV4 343 aaPredicted RBP22.29■■□□□ 1.16
ATPAF1-213ENST00000574428 CCNJQ5T5M9 372 aa22.29■■□□□ 1.16
ATPAF1-213ENST00000574428 HEPHL1Q6MZM0 1159 aa22.29■■□□□ 1.16
ATPAF1-213ENST00000574428 OR4N2Q8NGD1 307 aa22.29■■□□□ 1.16
ATPAF1-213ENST00000574428 NSMCE2Q96MF7 247 aa22.29■■□□□ 1.16
ATPAF1-213ENST00000574428 TRIM15Q9C019 465 aa22.29■■□□□ 1.16
ATPAF1-213ENST00000574428 SEMA4CQ9C0C4 833 aa22.29■■□□□ 1.16
ATPAF1-213ENST00000574428 RUBCNLQ9H714 662 aa22.29■■□□□ 1.16
ATPAF1-213ENST00000574428 GORASP2Q9H8Y8 452 aa22.29■■□□□ 1.16
ATPAF1-213ENST00000574428 WASF3Q9UPY6 502 aa22.29■■□□□ 1.16
ATPAF1-213ENST00000574428 CFL2Q9Y281 166 aa22.29■■□□□ 1.16
ATPAF1-213ENST00000574428 CHRM4P08173 479 aa22.28■■□□□ 1.16
ATPAF1-213ENST00000574428 CT45A8P0DMV1 189 aa22.28■■□□□ 1.16
ATPAF1-213ENST00000574428 CT45A9P0DMV2 189 aa22.28■■□□□ 1.16
ATPAF1-213ENST00000574428 CT45A2Q5DJT8 189 aa22.28■■□□□ 1.16
ATPAF1-213ENST00000574428 VASH2Q86V25 355 aa22.28■■□□□ 1.16
ATPAF1-213ENST00000574428 KIAA1143Q96AT1 154 aaPredicted RBP22.28■■□□□ 1.16
ATPAF1-213ENST00000574428 VMP1Q96GC9 406 aa22.28■■□□□ 1.16
ATPAF1-213ENST00000574428 BTBD9Q96Q07 612 aa22.28■■□□□ 1.16
ATPAF1-213ENST00000574428 FAM117AQ9C073 453 aa22.28■■□□□ 1.16
ATPAF1-213ENST00000574428 WWTR1Q9GZV5 400 aa22.28■■□□□ 1.16
ATPAF1-213ENST00000574428 STX18Q9P2W9 335 aaKnown RBP22.28■■□□□ 1.16
ATPAF1-213ENST00000574428 GPR55Q9Y2T6 319 aaPredicted RBP22.28■■□□□ 1.16
ATPAF1-213ENST00000574428 TRBV11-1A0A0K0K1C0 115 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 C2orf92A0A1B0GVN3 265 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 H6PDO95479 791 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 LIFP15018 202 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 BTBD16Q32M84 506 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 SLC29A4Q7RTT9 530 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 SLC30A8Q8IWU4 369 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 RMND5BQ96G75 393 aaPredicted RBP22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 IMMP1LQ96LU5 166 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 TREX2Q9BQ50 279 aaPredicted RBP22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 LIPT1Q9Y234 373 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 PCDHGB3Q9Y5G1 929 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 SPTBN2O15020 2390 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 AKAP13Q12802 2813 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 A0A1W2PQ72 361 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 OR6C76A6NM76 312 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 FKBP6O75344 327 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 PGM3O95394 542 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 SERPINA1P01009 418 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 KDELR2P33947 212 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 PLA2G5P39877 138 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 CRYBA2P53672 197 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 CRISP3P54108 245 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 POU6F2P78424 691 aaPredicted RBP22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 ARHGAP11BQ3KRB8 267 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 TBC1D25Q3MII6 688 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 DCST2Q5T1A1 773 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 INTS11Q5TA45 600 aaKnown RBP22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 HSDL2Q6YN16 418 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 NDUFAF7Q7L592 441 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 MRGPREQ86SM8 312 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 ZSCAN1Q8NBB4 408 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 ADIPOR1Q96A54 375 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 TRNT1Q96Q11 434 aaKnown RBP22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 BTBD2Q9BX70 525 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 NXF5Q9H1B4 397 aaKnown RBP22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 ZNF160Q9HCG1 818 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms