RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 SLC35A4Q96G79 324 aa16.47■□□□□ 0.23
CHD3-214ENST00000572579 COL21A1Q96P44 957 aa16.47■□□□□ 0.23
CHD3-214ENST00000572579 TRIB1Q96RU8 372 aa16.47■□□□□ 0.23
CHD3-214ENST00000572579 TUBA1CQ9BQE3 449 aa16.47■□□□□ 0.23
CHD3-214ENST00000572579 GPATCH1Q9BRR8 931 aaKnown RBP16.47■□□□□ 0.23
CHD3-214ENST00000572579 RTN4RQ9BZR6 473 aa16.47■□□□□ 0.23
CHD3-214ENST00000572579 OR2B2Q9GZK3 357 aa16.47■□□□□ 0.23
CHD3-214ENST00000572579 FOLH1BQ9HBA9 442 aa16.47■□□□□ 0.23
CHD3-214ENST00000572579 MID1IP1Q9NPA3 183 aa16.47■□□□□ 0.23
CHD3-214ENST00000572579 PSMC3IPQ9P2W1 217 aaPredicted RBP16.47■□□□□ 0.23
CHD3-214ENST00000572579 ZNF629Q9UEG4 869 aaPredicted RBP16.47■□□□□ 0.23
CHD3-214ENST00000572579 CCL27Q9Y4X3 112 aa16.47■□□□□ 0.23
CHD3-214ENST00000572579 HRNRQ86YZ3 2850 aaPredicted RBP16.47■□□□□ 0.23
CHD3-214ENST00000572579 MAP1AP78559 2803 aaPredicted RBP16.46■□□□□ 0.23
CHD3-214ENST00000572579 GNG14A0A1W2PPG7 69 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 MYO1GB0I1T2 1018 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 PLOD3O60568 738 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 REM1O75628 298 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 ENO1P06733 434 aaKnown RBP16.46■□□□□ 0.23
CHD3-214ENST00000572579 GSTA1P08263 222 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 CPN1P15169 458 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 KIR2DL3P43628 341 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 IST1P53990 364 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 ACSM2AQ08AH3 577 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 SPIN4Q56A73 249 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 ACSM2BQ68CK6 577 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 FAM71E1Q6IPT2 247 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 TRIM42Q8IWZ5 723 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 PM20D2Q8IYS1 436 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 CCNYL1Q8N7R7 359 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 CEP112Q8N8E3 955 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 KIF18AQ8NI77 898 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 RDH11Q8TC12 318 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 ZPLD1Q8TCW7 415 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 RNASE6Q93091 150 aaKnown RBP16.46■□□□□ 0.23
CHD3-214ENST00000572579 CALHM2Q9HA72 323 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 DNAJB12Q9NXW2 375 aaKnown RBP16.46■□□□□ 0.23
CHD3-214ENST00000572579 KLRF1Q9NZS2 232 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 FLRT3Q9NZU0 649 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 JKAMPQ9P055 326 aa16.46■□□□□ 0.23
CHD3-214ENST00000572579 CBR3O75828 277 aa16.45■□□□□ 0.22
CHD3-214ENST00000572579 ZWINTO95229 277 aa16.45■□□□□ 0.22
CHD3-214ENST00000572579 ANXA4P09525 319 aaPredicted RBP16.45■□□□□ 0.22
CHD3-214ENST00000572579 DDCP20711 480 aa16.45■□□□□ 0.22
CHD3-214ENST00000572579 LHX2P50458 406 aa16.45■□□□□ 0.22
CHD3-214ENST00000572579 PSG6Q00889 435 aa16.45■□□□□ 0.22
CHD3-214ENST00000572579 KIAA0040Q15053 153 aa16.45■□□□□ 0.22
CHD3-214ENST00000572579 TRIM46Q7Z4K8 759 aa16.45■□□□□ 0.22
CHD3-214ENST00000572579 ERP27Q96DN0 273 aa16.45■□□□□ 0.22
CHD3-214ENST00000572579 PFDN4Q9NQP4 134 aa16.45■□□□□ 0.22
CHD3-214ENST00000572579 RASSF1Q9NS23 344 aa16.45■□□□□ 0.22
CHD3-214ENST00000572579 DCDC2Q9UHG0 476 aa16.45■□□□□ 0.22
CHD3-214ENST00000572579 PTGDR2Q9Y5Y4 395 aa16.45■□□□□ 0.22
CHD3-214ENST00000572579 MED13LQ71F56 2210 aa16.45■□□□□ 0.22
CHD3-214ENST00000572579 ITPR3Q14573 2671 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 EXPH5Q8NEV8 1989 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 DVL2O14641 736 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 PLIN3O60664 434 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 CDH16O75309 829 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 ERN1O75460 977 aaKnown RBP16.44■□□□□ 0.22
CHD3-214ENST00000572579 ACTL6AO96019 429 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 IL2RAP01589 272 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 TACR1P25103 407 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 CTSSP25774 331 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 ASCL1P50553 236 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 B3GALT5-AS1P59052 145 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 SRYQ05066 204 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 C2orf80Q0P641 193 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 HEPACAMQ14CZ8 416 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 PLCZ1Q86YW0 608 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 SLC44A2Q8IWA5 706 aaPredicted RBP16.44■□□□□ 0.22
CHD3-214ENST00000572579 LINC01560Q8TB33 94 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 EFHD2Q96C19 240 aaPredicted RBP16.44■□□□□ 0.22
CHD3-214ENST00000572579 EGLN2Q96KS0 407 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 SHCBP1LQ9BZQ2 653 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 GLIPR2Q9H4G4 154 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 TAS2R7Q9NYW3 318 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 CBLCQ9ULV8 474 aa16.44■□□□□ 0.22
CHD3-214ENST00000572579 C2CD3Q4AC94 2353 aa16.43■□□□□ 0.22
CHD3-214ENST00000572579 UPK1AO00322 258 aa16.43■□□□□ 0.22
CHD3-214ENST00000572579 BCAS2O75934 225 aaPredicted RBP16.43■□□□□ 0.22
CHD3-214ENST00000572579 PSMG1O95456 288 aa16.43■□□□□ 0.22
CHD3-214ENST00000572579 JUNP05412 331 aaKnown RBP16.43■□□□□ 0.22
CHD3-214ENST00000572579 CYP4B1P13584 511 aa16.43■□□□□ 0.22
CHD3-214ENST00000572579 MC3RP41968 323 aa16.43■□□□□ 0.22
CHD3-214ENST00000572579 ART1P52961 327 aa16.43■□□□□ 0.22
CHD3-214ENST00000572579 CLDN15P56746 228 aa16.43■□□□□ 0.22
CHD3-214ENST00000572579 CLDN18P56856 261 aa16.43■□□□□ 0.22
CHD3-214ENST00000572579 DNAJB13P59910 316 aa16.43■□□□□ 0.22
CHD3-214ENST00000572579 SPDYAQ5MJ70 313 aa16.43■□□□□ 0.22
CHD3-214ENST00000572579 FRMD7Q6ZUT3 714 aa16.43■□□□□ 0.22
CHD3-214ENST00000572579 LARP4Q71RC2 724 aaKnown RBP eCLIP16.43■□□□□ 0.22
CHD3-214ENST00000572579 OR14L1PQ8NHC6 308 aa16.43■□□□□ 0.22
CHD3-214ENST00000572579 TMCO6Q96DC7 493 aa16.43■□□□□ 0.22
CHD3-214ENST00000572579 UCN2Q96RP3 112 aa16.43■□□□□ 0.22
CHD3-214ENST00000572579 TAS2R10Q9NYW0 307 aa16.43■□□□□ 0.22
CHD3-214ENST00000572579 POLR3HQ9Y535 204 aaPredicted RBP16.43■□□□□ 0.22
CHD3-214ENST00000572579 WIF1Q9Y5W5 379 aa16.43■□□□□ 0.22
CHD3-214ENST00000572579 NF1P21359 2839 aa16.43■□□□□ 0.22
CHD3-214ENST00000572579 A6NNC1 897 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms