RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 BBS1Q8NFJ9 593 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 RGMAQ96B86 450 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 ART5Q96L15 291 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 ING3Q9NXR8 418 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 GPR55Q9Y2T6 319 aaPredicted RBP16.41■□□□□ 0.22
SCARF1-205ENST00000571272 LRRK1Q38SD2 2015 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 CACNB4O00305 520 aaPredicted RBP16.41■□□□□ 0.22
SCARF1-205ENST00000571272 PROM1O43490 865 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 TBX19O60806 448 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 HMGN2P05204 90 aaKnown RBP16.41■□□□□ 0.22
SCARF1-205ENST00000571272 C8orf89P0DMQ9 161 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 GNSP15586 552 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 ARSBP15848 533 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 CSTF1Q05048 431 aaKnown RBP16.41■□□□□ 0.22
SCARF1-205ENST00000571272 DUSP6Q16828 381 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 RRM2BQ7LG56 351 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 NATD1Q8N6N6 113 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 ARIH2OSQ8N7S6 290 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 ZNF485Q8NCK3 441 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 BBS4Q96RK4 519 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 NTNG1Q9Y2I2 539 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 KIF26AQ9ULI4 1882 aaPredicted RBP16.41■□□□□ 0.22
SCARF1-205ENST00000571272 C5orf42Q9H799 3197 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 KIAA0355O15063 1070 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 FGBP02675 491 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 C1QBP02746 253 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 IFI30P13284 250 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 HOXD10P28358 340 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 SSR2P43308 183 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 CCR8P51685 355 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 CLDN20P56880 219 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 ZNF155Q12901 538 aaPredicted RBP16.4■□□□□ 0.22
SCARF1-205ENST00000571272 DCUN1D3Q8IWE4 304 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 FAM20CQ8IXL6 584 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 SPRYD4Q8WW59 207 aaPredicted RBP16.4■□□□□ 0.22
SCARF1-205ENST00000571272 RNF32Q9H0A6 362 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 EQTNQ9NQ60 294 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 ACSS1Q9NUB1 689 aaPredicted RBP16.4■□□□□ 0.22
SCARF1-205ENST00000571272 COL4A6Q14031 1691 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 A0A1B0GVC2 190 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 A0A1W2PS29 197 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 A6NIN4 97 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 PLOD3O60568 738 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 SLC2A10O95528 541 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 ACP5P13686 325 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 TRIM23P36406 574 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 P2RX3P56373 397 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 MESP2Q0VG99 397 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 CEP78Q5JTW2 689 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 PIP5KL1Q5T9C9 394 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 KLBQ86Z14 1044 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 CCDC116Q8IYX3 515 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 LINC00471Q8N535 108 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 ZC3HAV1LQ96H79 300 aaKnown RBP16.4■□□□□ 0.22
SCARF1-205ENST00000571272 HDHD2Q9H0R4 259 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 ISYNA1Q9NPH2 558 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 SLC35C2Q9NQQ7 365 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.4■□□□□ 0.22
SCARF1-205ENST00000571272 SEMA4GQ9NTN9 838 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 C17orf113A0A1B0GUU1 675 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 IRGMA1A4Y4 181 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 INMT-MINDY4F8WBC2 141 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 HRO43593 1189 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 HLA-DPB1P04440 258 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 RRAS2P62070 204 aaPredicted RBP16.4■□□□□ 0.22
SCARF1-205ENST00000571272 ASB18Q6ZVZ8 466 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 VRK2Q86Y07 508 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 PLCZ1Q86YW0 608 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 PLA2G15Q8NCC3 412 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 OR4M1Q8NGD0 313 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 OR4Q3Q8NH05 313 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 SMG7Q92540 1137 aaKnown RBP16.4■□□□□ 0.22
SCARF1-205ENST00000571272 SECISBP2Q96T21 854 aaKnown RBP16.4■□□□□ 0.22
SCARF1-205ENST00000571272 MARVELD1Q9BSK0 173 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 SPATA5L1Q9BVQ7 753 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 CSNK1G3Q9Y6M4 447 aa16.4■□□□□ 0.22
SCARF1-205ENST00000571272 KDM4EB2RXH2 506 aaPredicted RBP16.39■□□□□ 0.21
SCARF1-205ENST00000571272 ORC5O43913 435 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 TSC22D2O75157 780 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 LAG3P18627 525 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 GPR4P46093 362 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 AGFG1P52594 562 aaKnown RBP16.39■□□□□ 0.21
SCARF1-205ENST00000571272 TIGD3Q6B0B8 471 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 LAMTOR1Q6IAA8 161 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 OR4M2Q8NGB6 313 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 OR5H6Q8NGV6 325 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 BBS10Q8TAM1 723 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 GNPDA2Q8TDQ7 276 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 ARRDC3Q96B67 414 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 TRMT61BQ9BVS5 477 aaKnown RBP16.39■□□□□ 0.21
SCARF1-205ENST00000571272 FAM183AA6NL82 134 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 PGRMC2O15173 223 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 ELK1P19419 428 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 KHKP50053 298 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 RAB8AP61006 207 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 TNK1Q13470 666 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 ZNF311Q5JNZ3 666 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 IDNKQ5T6J7 187 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 FAM46CQ5VWP2 391 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 OR4C11Q6IEV9 310 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms