RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 NDUFAF7Q7L592 441 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 DHFR2Q86XF0 187 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 SLC30A8Q8IWU4 369 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 C9orf40Q8IXQ3 194 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 HIPK4Q8NE63 616 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 TMEM19Q96HH6 336 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 EFHD1Q9BUP0 239 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 SEMA4CQ9C0C4 833 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 FBXL4Q9UKA2 621 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 RRP15Q9Y3B9 282 aaKnown RBP14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 MSRB2Q9Y3D2 182 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 PCDHGB3Q9Y5G1 929 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 FRYQ5TBA9 3013 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 PEX12O00623 359 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 CREG1O75629 220 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 ATP6V1B2P21281 511 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 MAP3K8P41279 467 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 CLCN2P51788 898 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 POLE2P56282 527 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 POU6F2P78424 691 aaPredicted RBP14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 FUT5Q11128 374 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 GNA13Q14344 377 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 MYBPC3Q14896 1274 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 KPNB1Q14974 876 aaKnown RBP14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 SYPL1Q16563 259 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 FXNQ16595 210 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 GPAT3Q53EU6 434 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 GLYATQ6IB77 296 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 CYP2R1Q6VVX0 501 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 PROSER1Q86XN7 944 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 AMER2Q8N7J2 671 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 ANKFN1Q8N957 763 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 APCDD1LQ8NCL9 501 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 SLC38A5Q8WUX1 472 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 WDR60Q8WVS4 1066 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 PIK3R3Q92569 461 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 HOXB13Q92826 284 aaPredicted RBP14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 FAM162AQ96A26 154 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 NACC2Q96BF6 587 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 LRGUKQ96M69 825 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 BTBD9Q96Q07 612 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 CEP295Q9C0D2 2601 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 WWTR1Q9GZV5 400 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 ZNF160Q9HCG1 818 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 Q9N2J8 555 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 GIN1Q9NXP7 522 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 ACTR3BQ9P1U1 418 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 ZNF223Q9UK11 482 aaPredicted RBP14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 LIPT1Q9Y234 373 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 OR10H1Q9Y4A9 318 aa14.3□□□□□ -0.12
HERPUD1-219ENST00000570273 FREM2Q5SZK8 3169 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 C2orf92A0A1B0GVN3 265 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 GXYLT2A0PJZ3 443 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 PRAMEF27A3QJZ7 478 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 A8MUI8 341 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 A8MVJ9 347 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 H0YHG0 523 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 ACOT8O14734 319 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 SOX30O94993 753 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 AK1P00568 194 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 HPP00738 406 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 TFPTP0C1Z6 253 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 AQP1P29972 269 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 TRHRP34981 398 aaPredicted RBP14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 DCAF7P61962 342 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 PSG6Q00889 435 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 DMTNQ08495 405 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 CLN3Q13286 438 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 ATP1A4Q13733 1029 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 VEZF1Q14119 521 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 LRRC23Q53EV4 343 aaPredicted RBP14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 RPS26P11Q5JNZ5 115 aaPredicted RBP14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 DCST2Q5T1A1 773 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 INTS11Q5TA45 600 aaKnown RBP14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 PLAG1Q6DJT9 500 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 LCN8Q6JVE9 175 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 REEP3Q6NUK4 255 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 METTL25Q8N6Q8 603 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 BHLHE22Q8NFJ8 381 aaPredicted RBP14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 RMND5BQ96G75 393 aaPredicted RBP14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 IMMP1LQ96LU5 166 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 NSMCE2Q96MF7 247 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 BTBD2Q9BX70 525 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 DENND2DQ9H6A0 471 aaPredicted RBP14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 P4HTMQ9NXG6 502 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 CCDC88CQ9P219 2028 aa14.29□□□□□ -0.12
HERPUD1-219ENST00000570273 FRG2CA6NGY1 282 aa14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 CHRM4P08173 479 aa14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 PPICP45877 212 aa14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 ERFP50548 548 aa14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 CRISP3P54108 245 aa14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 RNF4P78317 190 aa14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 FOXK2Q01167 660 aa14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 MAPK11Q15759 364 aa14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 HEPHL1Q6MZM0 1159 aa14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 OLIG3Q7RTU3 272 aa14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 SPATA24Q86W54 205 aa14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 BBS10Q8TAM1 723 aa14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 M1APQ8TC57 530 aa14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 ADAMTS17Q8TE56 1095 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms