RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 IMPDH1P20839 514 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 ATP5F1P24539 256 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 TIA1P31483 386 aaKnown RBP eCLIP12.59□□□□□ -0.396e-6■□□□□ 11.3
GTF3C1-211ENST00000569653 ASCL1P50553 236 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 ART1P52961 327 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 TOMM20Q15388 145 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 CEBPEQ15744 281 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 CES4AQ5XG92 561 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 ADGRE4PQ86SQ3 457 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 SLC22A9Q8IVM8 553 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 OR1J4Q8NGS1 313 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 MBD3L2Q8NHZ7 208 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 RDH11Q8TC12 318 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 METTL6Q8TCB7 284 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 EPS8L3Q8TE67 593 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 RNASE6Q93091 150 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 ABTB1Q969K4 478 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 SLC35A4Q96G79 324 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 TRIB1Q96RU8 372 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 TUBA1CQ9BQE3 449 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 RTN4RQ9BZR6 473 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 C12orf65Q9H3J6 166 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 DNAJB12Q9NXW2 375 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 FLRT3Q9NZU0 649 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 CBLCQ9ULV8 474 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 CD8B2A6NJW9 211 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 ACOX3O15254 700 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 KRT6AP02538 564 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 KRT6BP04259 564 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 NUDT17P0C025 328 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 KIR2DL3P43628 341 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 KRT6CP48668 564 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 STARP49675 285 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 GFRA1P56159 465 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 BTKQ06187 659 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 LCP2Q13094 533 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 C6orf163Q5TEZ5 329 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 SLC30A6Q6NXT4 461 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 GALNT18Q6P9A2 607 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 RIBC1Q8N443 379 aaPredicted RBP12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 CAVIN3Q969G5 261 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 ADOQ96SZ5 270 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 FAIM2Q9BWQ8 316 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 FOLH1BQ9HBA9 442 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 RASSF1Q9NS23 344 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 JKAMPQ9P055 326 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 STK38LQ9Y2H1 464 aa12.58□□□□□ -0.4
GTF3C1-211ENST00000569653 A0A1W2PPR1 153 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 OR6C70A6NIJ9 312 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 FAM47E-STBD1D6RA91 191 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 DVL2O14641 736 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 ULK1O75385 1050 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 ESRRBO95718 433 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 HMOX2P30519 316 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 CCT5P48643 541 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 LHX2P50458 406 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 RIPPLY3P57055 190 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 B3GALT5-AS1P59052 145 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 PSG6Q00889 435 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 IFFO1Q0D2I5 559 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 SNTA1Q13424 505 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 CCDC153Q494R4 210 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 FLYWCH1Q4VC44 716 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 OR5M10Q6IEU7 315 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 PM20D2Q8IYS1 436 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 CCDC126Q96EE4 140 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 COL21A1Q96P44 957 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 POLDIP3Q9BY77 421 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 CXXC4Q9H2H0 198 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 SLC35C2Q9NQQ7 365 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 CCM2LQ9NUG4 571 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 SIRT5Q9NXA8 310 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 KLRF1Q9NZS2 232 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 CLCF1Q9UBD9 225 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 ZNF629Q9UEG4 869 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 PRODH2Q9UF12 536 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 PSME2Q9UL46 239 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 CFL2Q9Y281 166 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 CCL27Q9Y4X3 112 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 WIF1Q9Y5W5 379 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 ZNF780BQ9Y6R6 833 aa12.57□□□□□ -0.4
GTF3C1-211ENST00000569653 GNG14A0A1W2PPG7 69 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 SERTM1A2A2V5 107 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 A6NNC1 897 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 MYO1GB0I1T2 1018 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 COPEO14579 308 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 ZIC3O60481 467 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 PLOD3O60568 738 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 ERN1O75460 977 aaKnown RBP12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 REM1O75628 298 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 PSMG1O95456 288 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 ACTL6AO96019 429 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 IL2RAP01589 272 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 PROCP04070 461 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 ENO1P06733 434 aaKnown RBP12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 MYL2P10916 166 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 DRD2P14416 443 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 CPN1P15169 458 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 TCEA1P23193 301 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms