RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 HEY2Q9UBP5 337 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 MAPRE3Q9UPY8 281 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 DLGAP4Q9Y2H0 992 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 PLEKHA6Q9Y2H5 1048 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 FREM3P0C091 2139 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 PRRC2AP48634 2157 aaKnown RBP13.62□□□□□ -0.23
RNF40-209ENST00000566703 SERTM1A2A2V5 107 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 CCDC151A5D8V7 595 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 EEF1E1-BLOC1S5C9J1V9 151 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 EEF1E1O43324 174 aaKnown RBP13.62□□□□□ -0.23
RNF40-209ENST00000566703 PLOD3O60568 738 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 TSPAN2O60636 221 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 RAF1P04049 648 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 MPIP34949 423 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 KRT20P35900 424 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 SLCO1A2P46721 670 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 PCYT1AP49585 367 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 AGFG1P52594 562 aaKnown RBP13.62□□□□□ -0.23
RNF40-209ENST00000566703 PNLIPRP2P54317 469 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 LTB4RQ15722 352 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 ERCC6LQ2NKX8 1250 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 SPIN4Q56A73 249 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 TEX35Q5T0J7 233 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 FBXW10Q5XX13 1052 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 GALNT18Q6P9A2 607 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 GPRIN3Q6ZVF9 776 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 IFNEQ86WN2 208 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 MNS1Q8NEH6 495 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 LINC01560Q8TB33 94 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 METTL6Q8TCB7 284 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 RNF138Q8WVD3 245 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 RBM24Q9BX46 236 aaKnown RBP13.62□□□□□ -0.23
RNF40-209ENST00000566703 PFDN4Q9NQP4 134 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 GIMAP4Q9NUV9 329 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 TAS2R9Q9NYW1 312 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 TMEM216Q9P0N5 145 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 WIF1Q9Y5W5 379 aa13.62□□□□□ -0.23
RNF40-209ENST00000566703 A8MXE2 369 aa13.61□□□□□ -0.23
RNF40-209ENST00000566703 H0Y3Z8 333 aa13.61□□□□□ -0.23
RNF40-209ENST00000566703 PCDH7O60245 1069 aa13.61□□□□□ -0.23
RNF40-209ENST00000566703 DLX3O60479 287 aa13.61□□□□□ -0.23
RNF40-209ENST00000566703 ENO1P06733 434 aaKnown RBP13.61□□□□□ -0.23
RNF40-209ENST00000566703 IL3P08700 152 aa13.61□□□□□ -0.23
RNF40-209ENST00000566703 ABHD2P08910 425 aa13.61□□□□□ -0.23
RNF40-209ENST00000566703 CHN1P15882 459 aa13.61□□□□□ -0.23
RNF40-209ENST00000566703 ATP5F1P24539 256 aaPredicted RBP13.61□□□□□ -0.23
RNF40-209ENST00000566703 ECHS1P30084 290 aa13.61□□□□□ -0.23
RNF40-209ENST00000566703 HMOX2P30519 316 aa13.61□□□□□ -0.23
RNF40-209ENST00000566703 PRKAA2P54646 552 aa13.61□□□□□ -0.23
RNF40-209ENST00000566703 PKNOX1P55347 436 aa13.61□□□□□ -0.23
RNF40-209ENST00000566703 RAE1P78406 368 aaKnown RBP13.61□□□□□ -0.23
RNF40-209ENST00000566703 MRPS35P82673 323 aaKnown RBP13.61□□□□□ -0.23
RNF40-209ENST00000566703 FOXF2Q12947 444 aa13.61□□□□□ -0.23
RNF40-209ENST00000566703 SLC22A9Q8IVM8 553 aa13.61□□□□□ -0.23
RNF40-209ENST00000566703 C11orf24Q96F05 449 aaPredicted RBP13.61□□□□□ -0.23
RNF40-209ENST00000566703 POM121Q96HA1 1249 aa13.61□□□□□ -0.23
RNF40-209ENST00000566703 VSTM2LQ96N03 204 aa13.61□□□□□ -0.23
RNF40-209ENST00000566703 ADOQ96SZ5 270 aa13.61□□□□□ -0.23
RNF40-209ENST00000566703 HBEGFQ99075 208 aa13.61□□□□□ -0.23
RNF40-209ENST00000566703 PLEKHF2Q9H8W4 249 aa13.61□□□□□ -0.23
RNF40-209ENST00000566703 SLC35C2Q9NQQ7 365 aa13.61□□□□□ -0.23
RNF40-209ENST00000566703 CLCF1Q9UBD9 225 aa13.61□□□□□ -0.23
RNF40-209ENST00000566703 TACC2O95359 2948 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 AKAP9Q99996 3911 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 EXOC1LA0A1B0GW35 172 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 GNG14A0A1W2PPG7 69 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 CLCA1A8K7I4 914 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 PLOD2O00469 737 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 HCRTR2O43614 444 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 SLITRK5O94991 958 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 ATE1O95260 518 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 CRHP06850 196 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 ZNF708P17019 499 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 LHX2P50458 406 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 DIO3P55073 304 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 ADAM8P78325 824 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 SRYQ05066 204 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 ACSM2AQ08AH3 577 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 KEAP1Q14145 624 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 DEFB113Q30KQ7 82 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 TCHHL1Q5QJ38 904 aaPredicted RBP13.6□□□□□ -0.23
RNF40-209ENST00000566703 ACSM2BQ68CK6 577 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 FAM180BQ6P0A1 224 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 LARP4Q71RC2 724 aaKnown RBP eCLIP13.6□□□□□ -0.23
RNF40-209ENST00000566703 NOA1Q8NC60 698 aaKnown RBP13.6□□□□□ -0.23
RNF40-209ENST00000566703 OR9A2Q8NGT5 310 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 UHMK1Q8TAS1 419 aaKnown RBP13.6□□□□□ -0.23
RNF40-209ENST00000566703 RDH11Q8TC12 318 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 ACMSDQ8TDX5 336 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 C16orf78Q8WTQ4 265 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 SMPDL3BQ92485 455 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 KAT2AQ92830 837 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 INTS12Q96CB8 462 aaKnown RBP13.6□□□□□ -0.23
RNF40-209ENST00000566703 L3HYPDHQ96EM0 354 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 SFXN2Q96NB2 322 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 TMEM237Q96Q45 408 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 YIPF4Q9BSR8 244 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 G6PC3Q9BUM1 346 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 ACPTQ9BZG2 426 aa13.6□□□□□ -0.23
RNF40-209ENST00000566703 DLL4Q9NR61 685 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms