RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 ZNF840PA6NDX5 716 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 CCT8L1PA6NM43 557 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 PDLIM1O00151 329 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 TYROBPO43914 113 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 SRPX2O60687 465 aaPredicted RBP3.46□□□□□ -1.86
CHD9-215ENST00000565442 KBTBD11O94819 623 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 IGHV3-9P01782 118 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 PIGRP01833 764 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 SLC35G4P0C7Q5 338 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 RRASP10301 218 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 HTR5AP47898 357 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 DSCR10P59022 87 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 LMO4P61968 165 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 MRPS6P82932 125 aaKnown RBP3.46□□□□□ -1.86
CHD9-215ENST00000565442 EIF2B1Q14232 305 aaKnown RBP3.46□□□□□ -1.86
CHD9-215ENST00000565442 LTB4RQ15722 352 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 INAQ16352 499 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 LYG1Q8N1E2 194 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 CERS5Q8N5B7 392 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 BCORP1Q8N888 145 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 SELENOMQ8WWX9 145 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 DNAJA3Q96EY1 480 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 PIWIL1Q96J94 861 aaKnown RBP3.46□□□□□ -1.86
CHD9-215ENST00000565442 PYGO2Q9BRQ0 406 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 WRAP53Q9BUR4 548 aaKnown RBP3.46□□□□□ -1.86
CHD9-215ENST00000565442 TRIM9Q9C026 710 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 ZBP1Q9H171 429 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 RWDD1Q9H446 243 aaPredicted RBP3.46□□□□□ -1.86
CHD9-215ENST00000565442 KAT8Q9H7Z6 458 aaKnown RBP3.46□□□□□ -1.86
CHD9-215ENST00000565442 RPS10P5Q9NQ39 176 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 DCAF13Q9NV06 445 aaKnown RBP3.46□□□□□ -1.86
CHD9-215ENST00000565442 RAI14Q9P0K7 980 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 ZNF581Q9P0T4 197 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 MBD2Q9UBB5 411 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 GHRLQ9UBU3 117 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 PRODH2Q9UF12 536 aa3.46□□□□□ -1.86
CHD9-215ENST00000565442 COL5A2P05997 1499 aaPredicted RBP3.46□□□□□ -1.86
CHD9-215ENST00000565442 ATP8B3O60423 1300 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 IGHV3OR16-12A0A075B7B8 117 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 A0A087WWV3 80 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 A0A1W2PNU3 283 aaPredicted RBP3.45□□□□□ -1.86
CHD9-215ENST00000565442 FAM230AA0A1W2PPH8 454 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 TTC26A0AVF1 554 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 RGSL1A5PLK6 1076 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 ANKRD30BLA7E2S9 258 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 NPIPA2E9PIF3 369 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 E9PMD0 336 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 C11orf98E9PRG8 122 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 H3BTX0 84 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 SGK494L7N484 410 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 SAP18O00422 153 aaKnown RBP3.45□□□□□ -1.86
CHD9-215ENST00000565442 PDXKO00764 312 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 GPRIN2O60269 458 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 ZNF354AO60765 605 aaPredicted RBP3.45□□□□□ -1.86
CHD9-215ENST00000565442 TOM1L1O75674 476 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 TOXO94900 526 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 NDUFA7O95182 113 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 TRIM16O95361 564 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 CA3P07451 260 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 SNRPCP09234 159 aaKnown RBP3.45□□□□□ -1.86
CHD9-215ENST00000565442 HOXB7P09629 217 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 GSTT2P0CG29 244 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 GSTT2BP0CG30 244 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 PVRP15151 417 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 CCND2P30279 289 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 POLR2FP61218 127 aaKnown RBP3.45□□□□□ -1.86
CHD9-215ENST00000565442 ZP4Q12836 540 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 PPP1R3AQ16821 1122 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 ADPRMQ3LIE5 342 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 C12orf60Q5U649 245 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 DMKNQ6E0U4 476 aaPredicted RBP3.45□□□□□ -1.86
CHD9-215ENST00000565442 ZNF562Q6V9R5 426 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 Q7L0L9 218 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 ERASQ7Z444 233 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 NAXDQ8IW45 347 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 RFESDQ8TAC1 157 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 SLC25A36Q96CQ1 311 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 ZBED6CLQ96FA7 236 aaPredicted RBP3.45□□□□□ -1.86
CHD9-215ENST00000565442 C1orf147Q96MC9 270 aaPredicted RBP3.45□□□□□ -1.86
CHD9-215ENST00000565442 FOXN4Q96NZ1 517 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 CARD6Q9BX69 1037 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 VAT1LQ9HCJ6 419 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 TIGARQ9NQ88 270 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 CUTCQ9NTM9 273 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 DUS2Q9NX74 493 aaKnown RBP3.45□□□□□ -1.86
CHD9-215ENST00000565442 CLEC5AQ9NY25 188 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 MGAT4BQ9UQ53 548 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 DHRS7Q9Y394 339 aa3.45□□□□□ -1.86
CHD9-215ENST00000565442 MTF2Q9Y483 593 aaPredicted RBP3.45□□□□□ -1.86
CHD9-215ENST00000565442 NCAPD2Q15021 1401 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 HCFC1P51610 2035 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 TRIM49BA6NDI0 452 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 VPS26AO75436 327 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 SCGB2A1O75556 95 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 RHBDL1O75783 438 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 APBB3O95704 486 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 ANXA4P09525 319 aaPredicted RBP3.44□□□□□ -1.86
CHD9-215ENST00000565442 PAICSP22234 425 aaKnown RBP3.44□□□□□ -1.86
CHD9-215ENST00000565442 IDSP22304 550 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 HTD2P86397 168 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms