RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 UBXN8O00124 270 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 DYRK3O43781 588 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 CCDC166P0CW27 439 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 CPMP14384 443 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 BUD31P41223 144 aaPredicted RBP9.29□□□□□ -0.92
SF3B3-204ENST00000563739 PIK3CBP42338 1070 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 ARFIP1P53367 373 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 GPX6P59796 221 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 RPS4XP62701 263 aaKnown RBP9.29□□□□□ -0.92
SF3B3-204ENST00000563739 EEF1A1P68104 462 aaKnown RBP9.29□□□□□ -0.92
SF3B3-204ENST00000563739 MGAT5Q09328 741 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 PLCXD2Q0VAA5 305 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 PPP1R7Q15435 360 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 PGGHGQ32M88 737 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 PAGE2BQ5JRK9 111 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 EEF1A1P5Q5VTE0 462 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.29□□□□□ -0.92
SF3B3-204ENST00000563739 GGNQ86UU5 652 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 ANKMY2Q8IV38 441 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 KLHL7Q8IXQ5 586 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 C7orf57Q8NEG2 295 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 OR7G1Q8NGA0 311 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 EXT2Q93063 718 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 NPAS1Q99742 590 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 CXorf56Q9H5V9 222 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 PPANQ9NQ55 473 aaKnown RBP9.29□□□□□ -0.92
SF3B3-204ENST00000563739 KLRF1Q9NZS2 232 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 FLRT3Q9NZU0 649 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 MRPS18CQ9Y3D5 142 aaKnown RBP9.29□□□□□ -0.92
SF3B3-204ENST00000563739 TRRAPQ9Y4A5 3859 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 MGAM2Q2M2H8 2515 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 A8MV72 311 aaPredicted RBP9.28□□□□□ -0.92
SF3B3-204ENST00000563739 E7ESA3 106 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 K7EPI3 171 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 DYNC1I1O14576 645 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 CDH16O75309 829 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 IFNA2P01563 188 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 CT45A8P0DMV1 189 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 CT45A9P0DMV2 189 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 TBXA2RP21731 343 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 GRK2P25098 689 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 SERPINB1P30740 379 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 RAP1GDS1P52306 607 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 NRG3P56975 720 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 CORO7P57737 925 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 DR1Q01658 176 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 CKAP4Q07065 602 aaKnown RBP9.28□□□□□ -0.92
SF3B3-204ENST00000563739 MAP4K2Q12851 820 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.28□□□□□ -0.92
SF3B3-204ENST00000563739 TMEM44Q2T9K0 475 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 CHRFAM7AQ494W8 412 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 TRMT12Q53H54 448 aaKnown RBP9.28□□□□□ -0.92
SF3B3-204ENST00000563739 CT45A2Q5DJT8 189 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 HLA-DQA1Q5Y7H0 255 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 FAM180BQ6P0A1 224 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 ZNF572Q7Z3I7 529 aaPredicted RBP9.28□□□□□ -0.92
SF3B3-204ENST00000563739 ISCA2Q86U28 154 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 UBQLNLQ8IYU4 475 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 METTL25Q8N6Q8 603 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 SPATA4Q8NEY3 305 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 OR2M3Q8NG83 312 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 OR5M1Q8NGP8 315 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 TMBIM1Q969X1 311 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 ZBED6CLQ96FA7 236 aaPredicted RBP9.28□□□□□ -0.92
SF3B3-204ENST00000563739 LCORQ96JN0 433 aaPredicted RBP9.28□□□□□ -0.92
SF3B3-204ENST00000563739 ADGRG7Q96K78 797 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 ZNF681Q96N22 645 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 GPR22Q99680 433 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 KLHDC3Q9BQ90 382 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 PINK1Q9BXM7 581 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 KLHL4Q9C0H6 718 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 CNOT10Q9H9A5 744 aaKnown RBP9.28□□□□□ -0.92
SF3B3-204ENST00000563739 ZBTB26Q9HCK0 441 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 ASIC3Q9UHC3 531 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 GPR55Q9Y2T6 319 aaPredicted RBP9.28□□□□□ -0.92
SF3B3-204ENST00000563739 ZNF337Q9Y3M9 751 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 ZNF175Q9Y473 711 aa9.28□□□□□ -0.92
SF3B3-204ENST00000563739 PRKDCP78527 4128 aaKnown RBP9.28□□□□□ -0.92
SF3B3-204ENST00000563739 OR2M5A3KFT3 312 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 OR6C70A6NIJ9 312 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 EFCAB8A8MWE9 144 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 SHISA8B8ZZ34 492 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 H0YIV9 168 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 ACOX3O15254 700 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 TNFRSF21O75509 655 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 URI1O94763 535 aaPredicted RBP9.27□□□□□ -0.93
SF3B3-204ENST00000563739 ATP1B1P05026 303 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 PCSK2P16519 638 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 NT5EP21589 574 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 DPP4P27487 766 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 TLX1P31314 330 aaPredicted RBP9.27□□□□□ -0.93
SF3B3-204ENST00000563739 PIK3CGP48736 1102 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 XKP51811 444 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 NEK2P51955 445 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 RPP38P78345 283 aaKnown RBP9.27□□□□□ -0.93
SF3B3-204ENST00000563739 MRPS35P82673 323 aaKnown RBP9.27□□□□□ -0.93
SF3B3-204ENST00000563739 C2orf54Q08AI8 447 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 CUL3Q13618 768 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 PON3Q15166 354 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 HIST2H2ACQ16777 129 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms