RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 NDUFAF3Q9BU61 184 aa2.08□□□□□ -2.08
CHD9-207ENST00000562806 APOOQ9BUR5 198 aa2.08□□□□□ -2.08
CHD9-207ENST00000562806 RPAP3Q9H6T3 665 aaPredicted RBP2.08□□□□□ -2.08
CHD9-207ENST00000562806 ALG9Q9H6U8 611 aa2.08□□□□□ -2.08
CHD9-207ENST00000562806 TMEM9Q9P0T7 183 aa2.08□□□□□ -2.08
CHD9-207ENST00000562806 FAM153AQ9UHL3 310 aa2.08□□□□□ -2.08
CHD9-207ENST00000562806 BCAP29Q9UHQ4 241 aa2.08□□□□□ -2.08
CHD9-207ENST00000562806 ZNF490Q9ULM2 529 aaPredicted RBP2.08□□□□□ -2.08
CHD9-207ENST00000562806 BARX2Q9UMQ3 279 aaPredicted RBP2.08□□□□□ -2.08
CHD9-207ENST00000562806 SMC3Q9UQE7 1217 aa2.08□□□□□ -2.08
CHD9-207ENST00000562806 FKBP7Q9Y680 259 aa2.08□□□□□ -2.08
CHD9-207ENST00000562806 CROCCQ5TZA2 2017 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 KINO60870 393 aaKnown RBP2.07□□□□□ -2.08
CHD9-207ENST00000562806 BAG2O95816 211 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 WNT2P09544 360 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 SDC1P18827 310 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 HLA-DPA1P20036 260 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 PSMB1P20618 241 aaKnown RBP2.07□□□□□ -2.08
CHD9-207ENST00000562806 CHRNA3P32297 505 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 TRIM23P36406 574 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 PITPNBP48739 271 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 CCL11P51671 97 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 HNRNPFP52597 415 aaKnown RBP2.07□□□□□ -2.08
CHD9-207ENST00000562806 BTG3Q14201 252 aaPredicted RBP2.07□□□□□ -2.08
CHD9-207ENST00000562806 KRTAP13-3Q3SY46 172 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 CMPK2Q5EBM0 449 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 IL23RQ5VWK5 629 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 PRAMEF7Q5VXH5 474 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 MOB1BQ7L9L4 216 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 MIER3Q7Z3K6 550 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 UNC5CLQ8IV45 518 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 CENPSQ8N2Z9 138 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 MSANTD4Q8NCY6 345 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 ZNF560Q96MR9 790 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 CARD6Q9BX69 1037 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 NLNQ9BYT8 704 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 ATG10Q9H0Y0 220 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 EHD1Q9H4M9 534 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 IKZF5Q9H5V7 419 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 POLD4Q9HCU8 107 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 ELOVL2Q9NXB9 296 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 CYP39A1Q9NYL5 469 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 EHFQ9NZC4 300 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 KLRF1Q9NZS2 232 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 IL17CQ9P0M4 197 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 MBD2Q9UBB5 411 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 GALPQ9UBC7 116 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 MTRRQ9UBK8 725 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 USP6P35125 1406 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 RAD54L2Q9Y4B4 1467 aa2.07□□□□□ -2.08
CHD9-207ENST00000562806 PRRC2AP48634 2157 aaKnown RBP2.06□□□□□ -2.08
CHD9-207ENST00000562806 ZFP92A6NM28 416 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 DDX39AO00148 427 aaKnown RBP2.06□□□□□ -2.08
CHD9-207ENST00000562806 TLR4O00206 839 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 TOXO94900 526 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 ABHD2P08910 425 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 GNSP15586 552 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 IGHV1-2P23083 117 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 NF2P35240 595 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 UGT1A3P35503 534 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 NLRP11P59045 1033 aaKnown RBP2.06□□□□□ -2.08
CHD9-207ENST00000562806 RPL32P62910 135 aaKnown RBP2.06□□□□□ -2.08
CHD9-207ENST00000562806 GFPT1Q06210 699 aaPredicted RBP2.06□□□□□ -2.08
CHD9-207ENST00000562806 IL18R1Q13478 541 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 RAB35Q15286 201 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 PRR4Q16378 134 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 CYP51A1Q16850 503 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 SBK1Q52WX2 424 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 LEG1Q6P5S2 330 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 ADAMTSL5Q6ZMM2 481 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 BNIPLQ7Z465 357 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 P4HA3Q7Z4N8 544 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 FBXO16Q8IX29 292 aaPredicted RBP2.06□□□□□ -2.08
CHD9-207ENST00000562806 MCOLN2Q8IZK6 566 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 BATF2Q8N1L9 274 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 RNF175Q8N4F7 328 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 LRRC17Q8N6Y2 441 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 NEK11Q8NG66 645 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 ANKRD49Q8WVL7 239 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 PHYHIPQ92561 330 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 SNX21Q969T3 373 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 MCHR2Q969V1 340 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 RAB3CQ96E17 227 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 CCDC51Q96ER9 411 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 DNAJA3Q96EY1 480 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 C11orf24Q96F05 449 aaPredicted RBP2.06□□□□□ -2.08
CHD9-207ENST00000562806 VSIG2Q96IQ7 327 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 DEFB118Q96PH6 123 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 COQ7Q99807 217 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 WRAP53Q9BUR4 548 aaKnown RBP2.06□□□□□ -2.08
CHD9-207ENST00000562806 GLT8D2Q9H1C3 349 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 ZNF702PQ9H963 129 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 DCAF13Q9NV06 445 aaKnown RBP2.06□□□□□ -2.08
CHD9-207ENST00000562806 RBM28Q9NW13 759 aaKnown RBP2.06□□□□□ -2.08
CHD9-207ENST00000562806 KCNN3Q9UGI6 736 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 FZR1Q9UM11 496 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 EIF3LQ9Y262 564 aaKnown RBP2.06□□□□□ -2.08
CHD9-207ENST00000562806 CA5BQ9Y2D0 317 aa2.06□□□□□ -2.08
CHD9-207ENST00000562806 DHX29Q7Z478 1369 aaKnown RBP2.06□□□□□ -2.08
CHD9-207ENST00000562806 COL16A1Q07092 1604 aaPredicted RBP2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms