RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 PLEKHB1Q9UF11 243 aaPredicted RBP14.8□□□□□ -0.04
COMMD4-206ENST00000562610 C19orf53Q9UNZ5 99 aaPredicted RBP14.8□□□□□ -0.04
COMMD4-206ENST00000562610 ANKRD33BA6NCL7 494 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 WIPF3A6NGB9 483 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 TO15178 435 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 RFPL3SP0C7P2 107 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 GDF1P27539 372 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 CASP3P42574 277 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 CDK9P50750 372 aaKnown RBP14.79□□□□□ -0.04
COMMD4-206ENST00000562610 SLC18A1P54219 525 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 HYAL4Q2M3T9 481 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 ATG16L1Q676U5 607 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 MTFR2Q6P444 385 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 C3P1Q6ZMU1 363 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 NUP54Q7Z3B4 507 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 WDR53Q7Z5U6 358 aaPredicted RBP14.79□□□□□ -0.04
COMMD4-206ENST00000562610 PACS2Q86VP3 889 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 KRTCAP2Q8N6L1 136 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 OR7A2PQ8NGA2 310 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 FAM57AQ8TBR7 257 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 HGDQ93099 445 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 ARL8AQ96BM9 186 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 EFHD2Q96C19 240 aaPredicted RBP14.79□□□□□ -0.04
COMMD4-206ENST00000562610 COL21A1Q96P44 957 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 NODALQ96S42 347 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 ADOQ96SZ5 270 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 OSBPL11Q9BXB4 747 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 ANGPTL4Q9BY76 406 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 PLSCR2Q9NRY7 297 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 PNPOQ9NVS9 261 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 ATP6V1HQ9UI12 483 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 HAO1Q9UJM8 370 aa14.79□□□□□ -0.04
COMMD4-206ENST00000562610 USP9YO00507 2555 aaPredicted RBP14.79□□□□□ -0.04
COMMD4-206ENST00000562610 DOPEY1Q5JWR5 2465 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 PRAMEF25A6NGN4 478 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 OR6C70A6NIJ9 312 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 NPIPA2E9PIF3 369 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 NPIPA3F8WFD2 350 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 TRIM3O75382 744 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-206ENST00000562610 SNX4O95219 450 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 PSMG1O95456 288 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 G6PDP11413 515 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 GP1BBP13224 206 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 FRKP42685 505 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-206ENST00000562610 MAN2A2P49641 1150 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 PRKAG1P54619 331 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 PSPHP78330 225 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 PSG6Q00889 435 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 EMX2Q04743 252 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 SLC10A1Q14973 349 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 LARP4Q71RC2 724 aaKnown RBP eCLIP14.78□□□□□ -0.044e-6■■■■■ 28.7
COMMD4-206ENST00000562610 TRIM42Q8IWZ5 723 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 GOLGA6L1Q8N7Z2 621 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 OR4N2Q8NGD1 307 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 TMCO6Q96DC7 493 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 MS4A4EQ96PG1 132 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 AKTIPQ9H8T0 292 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 GALNT9Q9HCQ5 603 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 Q9N2J8 555 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 ACSS1Q9NUB1 689 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-206ENST00000562610 ATAD3AQ9NVI7 634 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 MARCOQ9UEW3 520 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-206ENST00000562610 PCNX1Q96RV3 2341 aa14.78□□□□□ -0.04
COMMD4-206ENST00000562610 UTP20O75691 2785 aaKnown RBP14.78□□□□□ -0.04
COMMD4-206ENST00000562610 SETXQ7Z333 2677 aaKnown RBP14.77□□□□□ -0.04
COMMD4-206ENST00000562610 FLNBO75369 2602 aaKnown RBP14.77□□□□□ -0.04
COMMD4-206ENST00000562610 GNB5O14775 395 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 ABCB7O75027 752 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 IGHG3P01860 377 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 IFI6P09912 130 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 KITP10721 976 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 LAMP1P11279 417 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 PRPS1L1P21108 318 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 RFX3P48380 749 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 EFR3AQ14156 821 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 TOMM20Q15388 145 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 SMU1Q2TAY7 513 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 CPTPQ5TA50 214 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 ANGPTL8Q6UXH0 198 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 TRILQ7L0X0 811 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 MAMDC2Q7Z304 686 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-206ENST00000562610 HDXQ7Z353 690 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 DOLPP1Q86YN1 238 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 EID3Q8N140 333 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 NUP43Q8NFH3 380 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 FBXO30Q8TB52 745 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 RAB3IL1Q8TBN0 382 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 SLC35A4Q96G79 324 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 TMEM41AQ96HV5 264 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 ATP6V1G3Q96LB4 118 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 PHF12Q96QT6 1004 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 PRPF18Q99633 342 aaKnown RBP14.77□□□□□ -0.05
COMMD4-206ENST00000562610 SLC6A15Q9H2J7 730 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 C3orf14Q9HBI5 128 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 THAP1Q9NVV9 213 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 ASIC5Q9NY37 505 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 TNFRSF10DQ9UBN6 386 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 MAPRE3Q9UPY8 281 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 MEMO1Q9Y316 297 aa14.77□□□□□ -0.05
COMMD4-206ENST00000562610 CACNA1CQ13936 2221 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms