RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 NMNAT1Q9HAN9 279 aaPredicted RBP10.9□□□□□ -0.66
PCAT1-202ENST00000561978 ACOT13Q9NPJ3 140 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 NECTIN3Q9NQS3 549 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 PRDM9Q9NQV7 894 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 RLIMQ9NVW2 624 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 APOBEC3BQ9UH17 382 aaKnown RBP10.9□□□□□ -0.66
PCAT1-202ENST00000561978 SLC9A8Q9Y2E8 581 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 CARD8Q9Y2G2 431 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 FREM2Q5SZK8 3169 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 SH3D21A4FU49 640 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 CLCA1A8K7I4 914 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 SLC22A1O15245 554 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 VIPP01282 170 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 TNFP01375 233 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 MT-ND2P03891 347 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 H1F0P07305 194 aaKnown RBP10.9□□□□□ -0.66
PCAT1-202ENST00000561978 CD59P13987 128 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 ACVR2AP27037 513 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 BUD31P41223 144 aaPredicted RBP10.9□□□□□ -0.66
PCAT1-202ENST00000561978 SLC19A1P41440 591 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 RAB8AP61006 207 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 HNRNPKP61978 463 aaKnown RBP eCLIP10.9□□□□□ -0.66
PCAT1-202ENST00000561978 BTN3A2P78410 334 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 RELAQ04206 551 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 ILF3Q12906 894 aaKnown RBP eCLIP10.9□□□□□ -0.66
PCAT1-202ENST00000561978 MAPK11Q15759 364 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 SMN1Q16637 294 aaKnown RBP10.9□□□□□ -0.66
PCAT1-202ENST00000561978 MOGQ16653 247 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 TCTN3Q6NUS6 607 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 BPHLQ86WA6 291 aaPredicted RBP10.9□□□□□ -0.66
PCAT1-202ENST00000561978 TRIM48Q8IWZ4 208 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 SLC25A45Q8N413 288 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 GPR32P1Q8NGA4 272 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 OR9Q2Q8NGE9 314 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 UTP15Q8TED0 518 aaKnown RBP10.9□□□□□ -0.66
PCAT1-202ENST00000561978 APH1BQ8WW43 257 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 NR4A3Q92570 626 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 UCN3Q969E3 161 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 UBE2FQ969M7 185 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 MACROD1Q9BQ69 325 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 COPS4Q9BT78 406 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 LRRC61Q9BV99 259 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 TMEM168Q9H0V1 697 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 CALML5Q9NZT1 146 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 PSORS1C1Q9UIG5 152 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 PHF11Q9UIL8 331 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 CDV3Q9UKY7 258 aaKnown RBP10.9□□□□□ -0.66
PCAT1-202ENST00000561978 LIPT1Q9Y234 373 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 ENTPD2Q9Y5L3 495 aa10.9□□□□□ -0.66
PCAT1-202ENST00000561978 KNTC1P50748 2209 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 RP1P56715 2156 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 OR2A25A4D2G3 310 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 GLOD5A6NK44 160 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 BTN3A3O00478 584 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 CASC3O15234 703 aaKnown RBP10.89□□□□□ -0.67
PCAT1-202ENST00000561978 ASNA1O43681 348 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 BCAS1O75363 584 aaPredicted RBP10.89□□□□□ -0.67
PCAT1-202ENST00000561978 PIAS2O75928 621 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 EML2O95834 649 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 RECKO95980 971 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 GASTP01350 101 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 ZNF182P17025 639 aaPredicted RBP10.89□□□□□ -0.67
PCAT1-202ENST00000561978 CERS1P27544 350 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 TLX1P31314 330 aaPredicted RBP10.89□□□□□ -0.67
PCAT1-202ENST00000561978 IDH2P48735 452 aaKnown RBP10.89□□□□□ -0.67
PCAT1-202ENST00000561978 CRISP1P54107 249 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 PRKAG1P54619 331 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 LIM2P55344 173 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 PTGES3Q15185 160 aaKnown RBP10.89□□□□□ -0.67
PCAT1-202ENST00000561978 SYPL1Q16563 259 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 ZNF829Q3KNS6 432 aaPredicted RBP10.89□□□□□ -0.67
PCAT1-202ENST00000561978 FRMPD2BQ6IN97 320 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 LINC00299Q6ZSB3 139 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 AHSA2Q719I0 299 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 CAMKVQ8NCB2 501 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 CCL4L1Q8NHW4 92 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 SUN3Q8TAQ9 357 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 LMX1AQ8TE12 382 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 GTPBP3Q969Y2 492 aaKnown RBP10.89□□□□□ -0.67
PCAT1-202ENST00000561978 TM4SF19Q96DZ7 209 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 CNRIP1Q96F85 164 aaPredicted RBP10.89□□□□□ -0.67
PCAT1-202ENST00000561978 UCK2Q9BZX2 261 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 TWSG1Q9GZX9 223 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 SERHL2Q9H4I8 314 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 TRIM45Q9H8W5 580 aaPredicted RBP10.89□□□□□ -0.67
PCAT1-202ENST00000561978 MS4A12Q9NXJ0 267 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 PAIP2BQ9ULR5 123 aaKnown RBP10.89□□□□□ -0.67
PCAT1-202ENST00000561978 CCDC88CQ9P219 2028 aa10.89□□□□□ -0.67
PCAT1-202ENST00000561978 NCOR2Q9Y618 2525 aa10.88□□□□□ -0.67
PCAT1-202ENST00000561978 FAM221BA6H8Z2 402 aa10.88□□□□□ -0.67
PCAT1-202ENST00000561978 A6NCN8 305 aa10.88□□□□□ -0.67
PCAT1-202ENST00000561978 DUXAA6NLW8 204 aa10.88□□□□□ -0.67
PCAT1-202ENST00000561978 OR5K4A6NMS3 321 aa10.88□□□□□ -0.67
PCAT1-202ENST00000561978 C4orf51C9J302 202 aa10.88□□□□□ -0.67
PCAT1-202ENST00000561978 FFAR1O14842 300 aa10.88□□□□□ -0.67
PCAT1-202ENST00000561978 GABARAPO95166 117 aa10.88□□□□□ -0.67
PCAT1-202ENST00000561978 AGR2O95994 175 aa10.88□□□□□ -0.67
PCAT1-202ENST00000561978 HMGN2P05204 90 aaKnown RBP10.88□□□□□ -0.67
PCAT1-202ENST00000561978 NR2F6P10588 404 aa10.88□□□□□ -0.67
PCAT1-202ENST00000561978 ENDOUP21128 410 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms