RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 RMND5BQ96G75 393 aaPredicted RBP11.83□□□□□ -0.52
USP3-213ENST00000559711 ZNF578Q96N58 590 aaPredicted RBP11.83□□□□□ -0.52
USP3-213ENST00000559711 DGAT2Q96PD7 388 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 PELOQ9BRX2 385 aaKnown RBP11.83□□□□□ -0.52
USP3-213ENST00000559711 NDC1Q9BTX1 674 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 YTHDF1Q9BYJ9 559 aaKnown RBP11.83□□□□□ -0.52
USP3-213ENST00000559711 ZNF350Q9GZX5 532 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 GMEB2Q9UKD1 530 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 SLC9A8Q9Y2E8 581 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 IFT52Q9Y366 437 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 MMACHCQ9Y4U1 282 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 MAU2Q9Y6X3 613 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 PCDH15Q96QU1 1955 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 ASXL3Q9C0F0 2248 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 UGT2B11O75310 529 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 RPLP0P05388 317 aaKnown RBP11.82□□□□□ -0.52
USP3-213ENST00000559711 CDH2P19022 906 aaPredicted RBP11.82□□□□□ -0.52
USP3-213ENST00000559711 MAOAP21397 527 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 POLR2IP36954 125 aaKnown RBP11.82□□□□□ -0.52
USP3-213ENST00000559711 OR1D4P47884 311 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 EMDP50402 254 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 RPS6KA3P51812 740 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 FUT7Q11130 342 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 IL18R1Q13478 541 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 CLPPQ16740 277 aaPredicted RBP11.82□□□□□ -0.52
USP3-213ENST00000559711 KCTD21Q4G0X4 260 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 ZNF311Q5JNZ3 666 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 COLEC12Q5KU26 742 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 PRAMEF17Q5VTA0 474 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 TTC33Q6PID6 262 aaPredicted RBP11.82□□□□□ -0.52
USP3-213ENST00000559711 ISLR2Q6UXK2 745 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 THAP5Q7Z6K1 395 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 SLC5A8Q8N695 610 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 OR10G2Q8NGC3 310 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 OR52J3Q8NH60 311 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 FEVQ99581 238 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 ARHGDIGQ99819 225 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 LMF2Q9BU23 707 aaKnown RBP11.82□□□□□ -0.52
USP3-213ENST00000559711 GRIP2Q9C0E4 1043 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 QRSL1Q9H0R6 528 aaKnown RBP11.82□□□□□ -0.52
USP3-213ENST00000559711 NMNAT1Q9HAN9 279 aaPredicted RBP11.82□□□□□ -0.52
USP3-213ENST00000559711 FANCEQ9HB96 536 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 NECTIN3Q9NQS3 549 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 KRT84Q9NSB2 600 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 KIF17Q9P2E2 1029 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 DHCR7Q9UBM7 475 aaKnown RBP11.82□□□□□ -0.52
USP3-213ENST00000559711 WDR45Q9Y484 360 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 CHST2Q9Y4C5 530 aa11.82□□□□□ -0.52
USP3-213ENST00000559711 TP53BP1Q12888 1972 aaPredicted RBP11.82□□□□□ -0.52
USP3-213ENST00000559711 IGHV5-10-1A0A0J9YXX1 117 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 A0A1B0GX78 115 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 OR2W5A6NFC9 320 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 PCDH17O14917 1159 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 STX11O75558 287 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 GUSBP08236 651 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 FUT4P22083 530 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 AVPR2P30518 371 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 SMIM11AP58511 58 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 ACY1Q03154 408 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 APOFQ13790 326 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 GANABQ14697 944 aaKnown RBP11.81□□□□□ -0.52
USP3-213ENST00000559711 ANGPT1Q15389 498 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 DCST2Q5T1A1 773 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 GALNT5Q7Z7M9 940 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 VRK2Q86Y07 508 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 APLFQ8IW19 511 aaPredicted RBP11.81□□□□□ -0.52
USP3-213ENST00000559711 C8orf59Q8N0T1 100 aaPredicted RBP11.81□□□□□ -0.52
USP3-213ENST00000559711 COX18Q8N8Q8 333 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 C7orf57Q8NEG2 295 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 OR52P1PQ8NH57 321 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 VANGL1Q8TAA9 524 aaPredicted RBP11.81□□□□□ -0.52
USP3-213ENST00000559711 PHF10Q8WUB8 498 aaKnown RBP11.81□□□□□ -0.52
USP3-213ENST00000559711 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.81□□□□□ -0.52
USP3-213ENST00000559711 ALPK1Q96QP1 1244 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 FUZQ9BT04 418 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 MRPS26Q9BYN8 205 aaKnown RBP11.81□□□□□ -0.52
USP3-213ENST00000559711 TRIM45Q9H8W5 580 aaPredicted RBP11.81□□□□□ -0.52
USP3-213ENST00000559711 ZNF304Q9HCX3 659 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 POLE3Q9NRF9 147 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 NDOR1Q9UHB4 597 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 MKLN1Q9UL63 735 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 A4GNTQ9UNA3 340 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 HCN4Q9Y3Q4 1203 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 IGKV3D-11A0A0A0MRZ8 115 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 AGAP5A6NIR3 686 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 M0R3H8 397 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 CCNB2O95067 398 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 H1F0P07305 194 aaKnown RBP11.81□□□□□ -0.52
USP3-213ENST00000559711 THBS1P07996 1170 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 RPS4Y1P22090 263 aaKnown RBP11.81□□□□□ -0.52
USP3-213ENST00000559711 GABRA3P34903 492 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 RYKP34925 604 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 PI4KAP42356 2102 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 DUSP3P51452 185 aaPredicted RBP11.81□□□□□ -0.52
USP3-213ENST00000559711 POU6F2P78424 691 aaPredicted RBP11.81□□□□□ -0.52
USP3-213ENST00000559711 KEAP1Q14145 624 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 ZNF267Q14586 743 aaPredicted RBP11.81□□□□□ -0.52
USP3-213ENST00000559711 ZNF691Q5VV52 312 aa11.81□□□□□ -0.52
USP3-213ENST00000559711 ZNF770Q6IQ21 691 aaPredicted RBP11.81□□□□□ -0.52
USP3-213ENST00000559711 DEF8Q6ZN54 512 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms