RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 SLC38A1Q9H2H9 487 aa13.3□□□□□ -0.28
RABGGTA-209ENST00000559551 SOX17Q9H6I2 414 aaPredicted RBP13.3□□□□□ -0.28
RABGGTA-209ENST00000559551 PNO1Q9NRX1 252 aaKnown RBP13.3□□□□□ -0.28
RABGGTA-209ENST00000559551 PTTG2Q9NZH5 202 aa13.3□□□□□ -0.28
RABGGTA-209ENST00000559551 SAMD4AQ9UPU9 718 aaKnown RBP13.3□□□□□ -0.28
RABGGTA-209ENST00000559551 ANGPT4Q9Y264 503 aa13.3□□□□□ -0.28
RABGGTA-209ENST00000559551 DSPPQ9NZW4 1301 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 A8MVJ9 347 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 C17orf105B2RV13 164 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 HNRNPRO43390 633 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 MFN2O95140 757 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 H6PDO95479 791 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 DDAH2O95865 285 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 EPPINO95925 133 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 IFNA16P05015 189 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 HBQ1P09105 142 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 PGDP52209 483 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 SELENOWP63302 87 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 PSG6Q00889 435 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 CHRNB3Q05901 458 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 TRIP10Q15642 601 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 FAM98BQ52LJ0 330 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 ZNF517Q6ZMY9 492 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 RAB11FIP2Q7L804 512 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 EPHX4Q8IUS5 362 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 ADAMTS15Q8TE58 950 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 PIK3R3Q92569 461 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 LIN37Q96GY3 246 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 C7orf34Q96L11 122 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 VSTM2LQ96N03 204 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 CMKLR1Q99788 373 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 CNPPD1Q9BV87 410 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 UGT2B28Q9BY64 529 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 QRSL1Q9H0R6 528 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 PIGUQ9H490 435 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 MAGIXQ9H6Y5 334 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 FOLH1BQ9HBA9 442 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 BCL2L10Q9HD36 194 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 GIN1Q9NXP7 522 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 ABCG2Q9UNQ0 655 aa13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 GPC6Q9Y625 555 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-209ENST00000559551 EXPH5Q8NEV8 1989 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 SPAARA0A1B0GVQ0 90 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 GXYLT2A0PJZ3 443 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 PRKNO60260 465 aaPredicted RBP13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 NR2F1P10589 423 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 CHRNEQ04844 493 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 NSDHLQ15738 373 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 CCNJQ5T5M9 372 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 INTS11Q5TA45 600 aaKnown RBP13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 HES3Q5TGS1 186 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 FAAH2Q6GMR7 532 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 FAM198BQ6UWH4 519 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 NPSR1Q6W5P4 371 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 C16orf52Q8NHV5 167 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 TPD52L3Q96J77 140 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 SLC26A1Q9H2B4 701 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 Q9H521 79 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 THUMPD1Q9NXG2 353 aaKnown RBP13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 VNN3Q9NY84 501 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 RPS6KA6Q9UK32 745 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 CHST2Q9Y4C5 530 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 HEMK1Q9Y5R4 338 aaPredicted RBP13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 PTPRZ1P23471 2315 aaPredicted RBP13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 DCHS1Q96JQ0 3298 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 CENPVL1A0A0U1RR11 272 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 PROB1E7EW31 1015 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 PRSS23O95084 383 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 NKX2-2O95096 273 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 IGKV3-11P04433 115 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 MAPK10P53779 464 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 PUM1Q14671 1186 aaKnown RBP eCLIP13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 PDK3Q15120 406 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 ATP6AP1Q15904 470 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 SFT2D3Q587I9 215 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 FRRS1Q6ZNA5 592 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 ZAR1Q86SH2 424 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 PATL1Q86TB9 770 aaKnown RBP13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 MARCH9Q86YJ5 346 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 SLC30A8Q8IWU4 369 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 CDRT4Q8N9R6 151 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 OR4N2Q8NGD1 307 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 ZNF721Q8TF20 911 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 DGCR14Q96DF8 476 aaKnown RBP13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 SENP5Q96HI0 755 aaPredicted RBP13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 LRFN5Q96NI6 719 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 SDF2Q99470 211 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 LMF2Q9BU23 707 aaKnown RBP13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 DOHHQ9BU89 302 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 EFHD1Q9BUP0 239 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 ULBP3Q9BZM4 244 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 SPRY4Q9C004 299 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 OR10A5Q9H207 317 aa13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 CHCHD3Q9NX63 227 aaKnown RBP13.28□□□□□ -0.28
RABGGTA-209ENST00000559551 IGHV3-20A0A0C4DH32 117 aa13.27□□□□□ -0.28
RABGGTA-209ENST00000559551 IDSB3KWA1 339 aa13.27□□□□□ -0.28
RABGGTA-209ENST00000559551 C5orf58C9J3I9 102 aa13.27□□□□□ -0.28
RABGGTA-209ENST00000559551 SUV39H1O43463 412 aa13.27□□□□□ -0.28
RABGGTA-209ENST00000559551 DIRAS1O95057 198 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms