RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 FOXI3A8MTJ6 420 aaPredicted RBP2.86□□□□□ -1.95
VRK1-207ENST00000557352 ZNF732B4DXR9 585 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 FAM86B1E9PN63 330 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 MSH4O15457 936 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 SLC37A4O43826 429 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 TDP2O95551 362 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 FAM86B2P0C5J1 330 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 SPP1P10451 314 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 SFNP31947 248 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 SLC1A6P48664 564 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 CAPZA1P52907 286 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 RPS6P62753 249 aaKnown RBP2.86□□□□□ -1.95
VRK1-207ENST00000557352 ZNF273Q14593 569 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 UBE2SQ16763 222 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 USH1GQ495M9 461 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 HERC4Q5GLZ8 1057 aaPredicted RBP2.86□□□□□ -1.95
VRK1-207ENST00000557352 SPOUT1Q5T280 376 aaKnown RBP2.86□□□□□ -1.95
VRK1-207ENST00000557352 ZNF658Q5TYW1 1059 aaPredicted RBP2.86□□□□□ -1.95
VRK1-207ENST00000557352 NEPROQ6NW34 567 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 SLC27A4Q6P1M0 643 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 ANKRD23Q86SG2 305 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 PHLDB2Q86SQ0 1253 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 METTL23Q86XA0 190 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 VSIG1Q86XK7 387 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 CCAR2Q8N163 923 aaKnown RBP2.86□□□□□ -1.95
VRK1-207ENST00000557352 OR6F1Q8NGZ6 308 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 SMPDL3AQ92484 453 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 ANP32BQ92688 251 aaKnown RBP2.86□□□□□ -1.95
VRK1-207ENST00000557352 PAGE5Q96GU1 130 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 EPSTI1Q96J88 318 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 MCCC1Q96RQ3 725 aaPredicted RBP2.86□□□□□ -1.95
VRK1-207ENST00000557352 TIPINQ9BVW5 301 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 TRIM9Q9C026 710 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 UBQLN3Q9H347 655 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 NMUR1Q9HB89 426 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 VAT1LQ9HCJ6 419 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 PXMP2Q9NR77 195 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 ZNF275Q9NSD4 429 aaPredicted RBP2.86□□□□□ -1.95
VRK1-207ENST00000557352 CYP39A1Q9NYL5 469 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 ADAM22Q9P0K1 906 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 GIMAP2Q9UG22 337 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 ITGA11Q9UKX5 1188 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 LIPGQ9Y5X9 500 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 UBIAD1Q9Y5Z9 338 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 UBE4BO95155 1302 aa2.86□□□□□ -1.95
VRK1-207ENST00000557352 PTPRDP23468 1912 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 KIAA0100Q14667 2235 aaKnown RBP2.85□□□□□ -1.95
VRK1-207ENST00000557352 SCN1AP35498 2009 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 ZSCAN5CA6NGD5 496 aaPredicted RBP2.85□□□□□ -1.95
VRK1-207ENST00000557352 CCDC188H7C350 402 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 KLRC4O43908 158 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 FGF19O95750 216 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 TPM3P06753 285 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 PDGFRAP16234 1089 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 ZNF18P17022 549 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 CCND2P30279 289 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 DEKP35659 375 aaKnown RBP2.85□□□□□ -1.95
VRK1-207ENST00000557352 BRCC3P46736 316 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 ZNF131P52739 623 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 SLC12A3P55017 1021 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 TPM4P67936 248 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 CCNA1P78396 465 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 IRX3P78415 501 aaPredicted RBP2.85□□□□□ -1.95
VRK1-207ENST00000557352 MYL5Q02045 173 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 ENPEPQ07075 957 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 SPAG1Q07617 926 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 TNK1Q13470 666 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 PNOCQ13519 176 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 CAMK4Q16566 473 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 RFTN2Q52LD8 501 aaPredicted RBP2.85□□□□□ -1.95
VRK1-207ENST00000557352 C6orf136Q5SQH8 315 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 REP15Q6BDI9 236 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 SNRNP48Q6IEG0 339 aaKnown RBP2.85□□□□□ -1.95
VRK1-207ENST00000557352 PET117Q6UWS5 81 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 C17orf107Q6ZR85 190 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 PLA2G4DQ86XP0 818 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 THNSL1Q8IYQ7 743 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 ZNF781Q8N8C0 355 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 FAM133AQ8N9E0 248 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 PIBF1Q8WXW3 757 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 RAD54LQ92698 747 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 CCDC47Q96A33 483 aaKnown RBP2.85□□□□□ -1.95
VRK1-207ENST00000557352 OPTNQ96CV9 577 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 DNAJC19Q96DA6 116 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 DHTKD1Q96HY7 919 aaPredicted RBP2.85□□□□□ -1.95
VRK1-207ENST00000557352 ZMAT2Q96NC0 199 aaKnown RBP2.85□□□□□ -1.95
VRK1-207ENST00000557352 ZNF285Q96NJ3 590 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 PARK7Q99497 189 aaKnown RBP2.85□□□□□ -1.95
VRK1-207ENST00000557352 TEKT3Q9BXF9 490 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 EDEM3Q9BZQ6 932 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 ZBP1Q9H171 429 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 ST6GALNAC4Q9H4F1 302 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.85□□□□□ -1.95
VRK1-207ENST00000557352 RWDD2AQ9UIY3 292 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 ODF2LQ9ULJ1 636 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 CLEC4EQ9ULY5 219 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 FBXO7Q9Y3I1 522 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 HBS1LQ9Y450 684 aaKnown RBP2.85□□□□□ -1.95
VRK1-207ENST00000557352 TANC1Q9C0D5 1861 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms