RNA–Protein interactions for RNA: ENST00000557267.1

KTN1-225, Transcript of kinectin 1, human

TSL 3

Gene KTN1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-225	ENST00000557267	BARX2	Q9UMQ3	279 aa	Predicted RBP	2.58	□□□□□ -2
KTN1-225	ENST00000557267	STX8	Q9UNK0	236 aa		2.58	□□□□□ -2
KTN1-225	ENST00000557267	NEU3	Q9UQ49	428 aa		2.58	□□□□□ -2
KTN1-225	ENST00000557267	RPH3A	Q9Y2J0	694 aa	Predicted RBP	2.58	□□□□□ -2
KTN1-225	ENST00000557267	ZNFX1	Q9P2E3	1918 aa	Known RBP	2.58	□□□□□ -2
KTN1-225	ENST00000557267	TRBV7-9	A0A0J9YWB2	115 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	LRIT2	A6NDA9	550 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	PDLIM1	O00151	329 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	OR7A17	O14581	309 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	MAGEB4	O15481	346 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-225	ENST00000557267	HTATSF1	O43719	755 aa	Known RBP	2.57	□□□□□ -2
KTN1-225	ENST00000557267	CA11	O75493	328 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	SDC1	P18827	310 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	PTBP1	P26599	531 aa	Known RBP eCLIP	2.57	□□□□□ -2	6e-7	■■■■■ 36.7
KTN1-225	ENST00000557267	NF2	P35240	595 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	NSF	P46459	744 aa	Known RBP	2.57	□□□□□ -2
KTN1-225	ENST00000557267	POU3F4	P49335	361 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	CAV2	P51636	162 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	BCL2L1	Q07817	233 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	HERPUD1	Q15011	391 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	ZNF528	Q3MIS6	628 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	CCDC14	Q49A88	953 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	RANBP3L	Q86VV4	465 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-225	ENST00000557267	C9orf40	Q8IXQ3	194 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	MLKL	Q8NB16	471 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	OR10H4	Q8NGA5	316 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	DNAJA3	Q96EY1	480 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	CNPY3	Q9BT09	278 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	OSBPL8	Q9BZF1	889 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	GLT8D2	Q9H1C3	349 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	CARD9	Q9H257	536 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	AKAP7	Q9P0M2	348 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-225	ENST00000557267	PURG	Q9UJV8	347 aa	Known RBP	2.57	□□□□□ -2
KTN1-225	ENST00000557267	FBXW2	Q9UKT8	454 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	ZNF175	Q9Y473	711 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	ARHGAP21	Q5T5U3	1957 aa		2.57	□□□□□ -2
KTN1-225	ENST00000557267	CDC42BPB	Q9Y5S2	1711 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	ZNF263	O14978	683 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	ARPC1B	O15143	372 aa	Known RBP	2.56	□□□□□ -2
KTN1-225	ENST00000557267	APRT	P07741	180 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	ALOX5	P09917	674 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	PSG2	P11465	335 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	RAG2	P55895	527 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	ZNF45	Q02386	682 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	LRRC63	Q05C16	580 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	CAMK4	Q16566	473 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	SGCB	Q16585	318 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	CLPP	Q16740	277 aa	Predicted RBP	2.56	□□□□□ -2
KTN1-225	ENST00000557267	UFSP1	Q6NVU6	142 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	IRGC	Q6NXR0	463 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	TMED8	Q6PL24	325 aa	Predicted RBP	2.56	□□□□□ -2
KTN1-225	ENST00000557267	CHCHD4	Q8N4Q1	142 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	BBS1	Q8NFJ9	593 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	GDAP1	Q8TB36	358 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	TSPAN18	Q96SJ8	248 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	FAM213A	Q9BRX8	229 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	PTGES2	Q9H7Z7	377 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	NANOG	Q9H9S0	305 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	ZNF331	Q9NQX6	463 aa	Predicted RBP	2.56	□□□□□ -2
KTN1-225	ENST00000557267	ELOVL2	Q9NXB9	296 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	LHX3	Q9UBR4	397 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	ZNF221	Q9UK13	617 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	SNX5	Q9Y5X3	404 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	MEGF6	O75095	1541 aa		2.56	□□□□□ -2
KTN1-225	ENST00000557267	IGKV6-21	A0A0C4DH24	114 aa		2.55	□□□□□ -2
KTN1-225	ENST00000557267	SMIM30	A4D0T7	59 aa		2.55	□□□□□ -2
KTN1-225	ENST00000557267	GPX5	O75715	221 aa		2.55	□□□□□ -2
KTN1-225	ENST00000557267	NPY2R	P49146	381 aa		2.55	□□□□□ -2
KTN1-225	ENST00000557267	RPL32	P62910	135 aa	Known RBP	2.55	□□□□□ -2
KTN1-225	ENST00000557267	NOP14	P78316	857 aa	Known RBP	2.55	□□□□□ -2
KTN1-225	ENST00000557267	AARD	Q4LEZ3	155 aa		2.55	□□□□□ -2
KTN1-225	ENST00000557267	TFDP3	Q5H9I0	405 aa		2.55	□□□□□ -2
KTN1-225	ENST00000557267	GLRA4	Q5JXX5	417 aa		2.55	□□□□□ -2
KTN1-225	ENST00000557267	HECTD3	Q5T447	861 aa		2.55	□□□□□ -2
KTN1-225	ENST00000557267	AGBL2	Q5U5Z8	902 aa		2.55	□□□□□ -2
KTN1-225	ENST00000557267	METTL11B	Q5VVY1	283 aa		2.55	□□□□□ -2
KTN1-225	ENST00000557267	TRPM8	Q7Z2W7	1104 aa		2.55	□□□□□ -2
KTN1-225	ENST00000557267	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	2.55	□□□□□ -2
KTN1-225	ENST00000557267	COLGALT1	Q8NBJ5	622 aa		2.55	□□□□□ -2
KTN1-225	ENST00000557267	LPCAT1	Q8NF37	534 aa		2.55	□□□□□ -2
KTN1-225	ENST00000557267	P3H4	Q92791	437 aa		2.55	□□□□□ -2
KTN1-225	ENST00000557267	DLX4	Q92988	240 aa	Predicted RBP	2.55	□□□□□ -2
KTN1-225	ENST00000557267	PLEKHF1	Q96S99	279 aa		2.55	□□□□□ -2
KTN1-225	ENST00000557267	NLN	Q9BYT8	704 aa		2.55	□□□□□ -2
KTN1-225	ENST00000557267	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	2.55	□□□□□ -2
KTN1-225	ENST00000557267	ABCG4	Q9H172	646 aa		2.55	□□□□□ -2
KTN1-225	ENST00000557267	ABCG8	Q9H221	673 aa		2.55	□□□□□ -2
KTN1-225	ENST00000557267	TRMT6	Q9UJA5	497 aa	Known RBP	2.55	□□□□□ -2
KTN1-225	ENST00000557267	KLHDC2	Q9Y2U9	406 aa		2.55	□□□□□ -2
KTN1-225	ENST00000557267	DHRS7	Q9Y394	339 aa		2.55	□□□□□ -2
KTN1-225	ENST00000557267	NPIPA2	E9PIF3	369 aa		2.54	□□□□□ -2
KTN1-225	ENST00000557267	LAT	O43561	262 aa		2.54	□□□□□ -2
KTN1-225	ENST00000557267	SDC3	O75056	442 aa		2.54	□□□□□ -2
KTN1-225	ENST00000557267	KRTAP5-8	O75690	187 aa		2.54	□□□□□ -2
KTN1-225	ENST00000557267	MMP23A	O75900	390 aa		2.54	□□□□□ -2
KTN1-225	ENST00000557267	IGSF6	O95976	241 aa		2.54	□□□□□ -2
KTN1-225	ENST00000557267	CYP11B1	P15538	503 aa		2.54	□□□□□ -2
KTN1-225	ENST00000557267	RBMX	P38159	391 aa	Known RBP	2.54	□□□□□ -2
KTN1-225	ENST00000557267	NME5	P56597	212 aa		2.54	□□□□□ -2
KTN1-225	ENST00000557267	DPY19L2P2	Q6ZN68	376 aa		2.54	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms