RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 QPCTLQ9NXS2 382 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 MARCOQ9UEW3 520 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-224ENST00000556737 CFL2Q9Y281 166 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 GPR55Q9Y2T6 319 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-224ENST00000556737 C15orf41Q9Y2V0 281 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 FIS1Q9Y3D6 152 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 DNAJC15Q9Y5T4 150 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 APCP25054 2843 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 DNAJC13O75165 2243 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 TRGV5A0A0B4J1U4 118 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 CAPN14A8MX76 684 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 TP53I11O14683 189 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 BCKDKO14874 412 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 KLF11O14901 512 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 LSM1O15116 133 aaKnown RBP9.45□□□□□ -0.9
SHMT2-224ENST00000556737 HNRNPRO43390 633 aaKnown RBP9.45□□□□□ -0.9
SHMT2-224ENST00000556737 ITM2AO43736 263 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 NPHS1O60500 1241 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 PLOD3O60568 738 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 HCN1O60741 890 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 UGT2B11O75310 529 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 CT45A8P0DMV1 189 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 CT45A9P0DMV2 189 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 NAGAP17050 411 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 SDC1P18827 310 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 DRD5P21918 477 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 GDF1P27539 372 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 MC3RP41968 323 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 PPICP45877 212 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 MAN2A2P49641 1150 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 CORO7P57737 925 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 NUP107P57740 925 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 C2orf80Q0P641 193 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 UGT3A2Q3SY77 523 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 CT45A2Q5DJT8 189 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 CES4AQ5XG92 561 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 SP5Q6BEB4 398 aaPredicted RBP9.45□□□□□ -0.9
SHMT2-224ENST00000556737 PAOXQ6QHF9 649 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 EID3Q8N140 333 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 ACBD4Q8NC06 268 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 BCAS4Q8TDM0 211 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 ZNF764Q96H86 408 aaPredicted RBP9.45□□□□□ -0.9
SHMT2-224ENST00000556737 TMEM41AQ96HV5 264 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 METTL2AQ96IZ6 378 aaKnown RBP9.45□□□□□ -0.9
SHMT2-224ENST00000556737 EGLN2Q96KS0 407 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 ZNF395Q9H8N7 513 aaPredicted RBP9.45□□□□□ -0.9
SHMT2-224ENST00000556737 FOLH1BQ9HBA9 442 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 LRTM1Q9HBL6 345 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 ACKR4Q9NPB9 350 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 TAS2R7Q9NYW3 318 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 PRODH2Q9UF12 536 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 NOTCH2Q04721 2471 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 ABCA12Q86UK0 2595 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 DCHS2Q6V1P9 2916 aa9.45□□□□□ -0.9
SHMT2-224ENST00000556737 A0A087WV62 115 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 B4DXG7 233 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 SLC28A1O00337 649 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 PIP5K1BO14986 540 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 SNPHO15079 494 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 TSPAN2O60636 221 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 EDF1O60869 148 aaKnown RBP9.44□□□□□ -0.9
SHMT2-224ENST00000556737 ERN1O75460 977 aaKnown RBP9.44□□□□□ -0.9
SHMT2-224ENST00000556737 BCAS2O75934 225 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-224ENST00000556737 SNX4O95219 450 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 HPNP05981 417 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 ACVR2AP27037 513 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 PTPN6P29350 595 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 SERPINB5P36952 375 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 KIR3DL1P43629 444 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 TRPC1P48995 793 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 CDK9P50750 372 aaKnown RBP9.44□□□□□ -0.9
SHMT2-224ENST00000556737 NCBP2P52298 156 aaKnown RBP eCLIP9.44□□□□□ -0.9
SHMT2-224ENST00000556737 DCAF7P61962 342 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 RPL38P63173 70 aaKnown RBP9.44□□□□□ -0.9
SHMT2-224ENST00000556737 GABPB1Q06547 395 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-224ENST00000556737 PDE7AQ13946 482 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 SLC10A1Q14973 349 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 GXYLT1Q4G148 440 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 ZNF385BQ569K4 471 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 XKR7Q5GH72 579 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 ARL13AQ5H913 290 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-224ENST00000556737 NEIL3Q8TAT5 605 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 TWIST2Q8WVJ9 160 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 TMBIM1Q969X1 311 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 SDCCAG3Q96C92 435 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 SLC35A4Q96G79 324 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 JSRP1Q96MG2 331 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-224ENST00000556737 AMDHD1Q96NU7 426 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 ZNF317Q96PQ6 595 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-224ENST00000556737 CCT8L2Q96SF2 557 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 CCT7Q99832 543 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 TREX2Q9BQ50 279 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-224ENST00000556737 ELAC2Q9BQ52 826 aaKnown RBP9.44□□□□□ -0.9
SHMT2-224ENST00000556737 OSBPL11Q9BXB4 747 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 TRIM8Q9BZR9 551 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 GLIPR2Q9H4G4 154 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 GALNT9Q9HCQ5 603 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 NPHS2Q9NP85 383 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 CHST11Q9NPF2 352 aa9.44□□□□□ -0.9
SHMT2-224ENST00000556737 MIEF1Q9NQG6 463 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms