RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 TNFRSF21O75509 655 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 PIAS1O75925 651 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 SOD3P08294 240 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 FCGR2AP12318 317 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 STMN1P16949 149 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 S1PR1P21453 382 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 IL12BP29460 328 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 DEKP35659 375 aaKnown RBP12.52□□□□□ -0.41
ACTN1-219ENST00000556432 ARL1P40616 181 aaPredicted RBP12.52□□□□□ -0.41
ACTN1-219ENST00000556432 CTBP2P56545 445 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 ARL4CP56559 192 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 FRG1Q14331 258 aaKnown RBP12.52□□□□□ -0.41
ACTN1-219ENST00000556432 SLMAPQ14BN4 828 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 SGCBQ16585 318 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 CPSF6Q16630 551 aaKnown RBP eCLIP12.52□□□□□ -0.41
ACTN1-219ENST00000556432 C6orf52Q5T4I8 152 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 FAM214BQ7L5A3 538 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 GBP7Q8N8V2 638 aaPredicted RBP12.52□□□□□ -0.41
ACTN1-219ENST00000556432 OR52R1Q8NGF1 315 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 RAB3IL1Q8TBN0 382 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 LRRC39Q96DD0 335 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 PBKQ96KB5 322 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 ADOQ96SZ5 270 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 KCNK17Q96T54 332 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 TMEM204Q9BSN7 226 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 NTMT1Q9BV86 223 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 PRRG4Q9BZD6 226 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 PPP4R1LQ9P1A2 415 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 TXNDC16Q9P2K2 825 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 PRODH2Q9UF12 536 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 LIPT1Q9Y234 373 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 PLLPQ9Y342 182 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 MRPS18CQ9Y3D5 142 aaKnown RBP12.52□□□□□ -0.41
ACTN1-219ENST00000556432 RNF115Q9Y4L5 304 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 TEX264Q9Y6I9 313 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 A0A1W2PP18 115 aa12.51□□□□□ -0.41
ACTN1-219ENST00000556432 OR6C70A6NIJ9 312 aa12.51□□□□□ -0.41
ACTN1-219ENST00000556432 OVOL3O00110 214 aa12.51□□□□□ -0.41
ACTN1-219ENST00000556432 UBXN8O00124 270 aa12.51□□□□□ -0.41
ACTN1-219ENST00000556432 ERAL1O75616 437 aaKnown RBP12.51□□□□□ -0.41
ACTN1-219ENST00000556432 IGHV4-39P01824 125 aa12.51□□□□□ -0.41
ACTN1-219ENST00000556432 HK1P19367 917 aa12.51□□□□□ -0.41
ACTN1-219ENST00000556432 FEN1P39748 380 aaKnown RBP12.51□□□□□ -0.41
ACTN1-219ENST00000556432 SUCLG1P53597 346 aaKnown RBP12.51□□□□□ -0.41
ACTN1-219ENST00000556432 DSCR4P56555 118 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-219ENST00000556432 B3GALT5-AS1P59052 145 aa12.51□□□□□ -0.41
ACTN1-219ENST00000556432 RPS3AP61247 264 aaKnown RBP12.51□□□□□ -0.41
ACTN1-219ENST00000556432 CUL3Q13618 768 aa12.51□□□□□ -0.41
ACTN1-219ENST00000556432 STAC2Q6ZMT1 411 aa12.51□□□□□ -0.41
ACTN1-219ENST00000556432 STAG3L4Q8TBR4 150 aa12.51□□□□□ -0.41
ACTN1-219ENST00000556432 SMAP2Q8WU79 429 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-219ENST00000556432 UBTD2Q8WUN7 234 aa12.51□□□□□ -0.41
ACTN1-219ENST00000556432 GFM2Q969S9 779 aaKnown RBP12.51□□□□□ -0.41
ACTN1-219ENST00000556432 ALG2Q9H553 416 aa12.51□□□□□ -0.41
ACTN1-219ENST00000556432 SMYD2Q9NRG4 433 aa12.51□□□□□ -0.41
ACTN1-219ENST00000556432 MAT2BQ9NZL9 334 aa12.51□□□□□ -0.41
ACTN1-219ENST00000556432 CLEC4AQ9UMR7 237 aa12.51□□□□□ -0.41
ACTN1-219ENST00000556432 MAGED1Q9Y5V3 778 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-219ENST00000556432 C17orf51A8MQB3 221 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 SCO2O43819 266 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 GPRIN2O60269 458 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 AQP8O94778 261 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 WISP3O95389 354 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-219ENST00000556432 KLK1P06870 262 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 DRD5P21918 477 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 PPICP45877 212 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 PIK3CGP48736 1102 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 CLDN15P56746 228 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 CLDN20P56880 219 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 SRSF2Q01130 221 aaKnown RBP12.5□□□□□ -0.41
ACTN1-219ENST00000556432 ILF2Q12905 390 aaKnown RBP12.5□□□□□ -0.41
ACTN1-219ENST00000556432 STX5Q13190 355 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 EFR3AQ14156 821 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 MORF4L2Q15014 288 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 PRICKLE4Q2TBC4 344 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 LIPJQ5W064 366 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 LARP4Q71RC2 724 aaKnown RBP eCLIP12.5□□□□□ -0.41
ACTN1-219ENST00000556432 FBXO36Q8NEA4 188 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 OR5M1Q8NGP8 315 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 OR6K3Q8NGY3 331 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 RHNO1Q9BSD3 238 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 DSN1Q9H410 356 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 BARX1Q9HBU1 254 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-219ENST00000556432 PFDN4Q9NQP4 134 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 ZNF337Q9Y3M9 751 aa12.5□□□□□ -0.41
ACTN1-219ENST00000556432 PRR14LQ5THK1 2151 aa12.49□□□□□ -0.41
ACTN1-219ENST00000556432 NDUFS7O75251 213 aa12.49□□□□□ -0.41
ACTN1-219ENST00000556432 CBX7O95931 251 aa12.49□□□□□ -0.41
ACTN1-219ENST00000556432 CD3EP07766 207 aa12.49□□□□□ -0.41
ACTN1-219ENST00000556432 PCSK2P16519 638 aa12.49□□□□□ -0.41
ACTN1-219ENST00000556432 CSNK2A2P19784 350 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-219ENST00000556432 MAPK12P53778 367 aa12.49□□□□□ -0.41
ACTN1-219ENST00000556432 GPX6P59796 221 aa12.49□□□□□ -0.41
ACTN1-219ENST00000556432 MGAT2Q10469 447 aa12.49□□□□□ -0.41
ACTN1-219ENST00000556432 MAP4K2Q12851 820 aa12.49□□□□□ -0.41
ACTN1-219ENST00000556432 PDIA2Q13087 525 aaKnown RBP12.49□□□□□ -0.41
ACTN1-219ENST00000556432 FASTKD3Q14CZ7 662 aaKnown RBP12.49□□□□□ -0.41
ACTN1-219ENST00000556432 GUSBP1Q15486 140 aa12.49□□□□□ -0.41
ACTN1-219ENST00000556432 LTB4RQ15722 352 aa12.49□□□□□ -0.41
ACTN1-219ENST00000556432 CTU2Q2VPK5 515 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms