RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 SZRD1Q7Z422 152 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 WDR53Q7Z5U6 358 aaPredicted RBP13.93□□□□□ -0.18
ACTN1-217ENST00000556203 RIMKLAQ8IXN7 391 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 OR4N2Q8NGD1 307 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 SLC35A4Q96G79 324 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 ZNF597Q96LX8 424 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 COL21A1Q96P44 957 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 ADOQ96SZ5 270 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 PRPF18Q99633 342 aaKnown RBP13.93□□□□□ -0.18
ACTN1-217ENST00000556203 ANGPTL4Q9BY76 406 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 ZNF703Q9H7S9 590 aaPredicted RBP13.93□□□□□ -0.18
ACTN1-217ENST00000556203 PLSCR2Q9NRY7 297 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 ATAD3AQ9NVI7 634 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 LIPGQ9Y5X9 500 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 A0A1W2PRB8 838 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 WIPF3A6NGB9 483 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 OR6C70A6NIJ9 312 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 HMGB1P1B2RPK0 211 aaPredicted RBP13.92□□□□□ -0.18
ACTN1-217ENST00000556203 CCL21O00585 134 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 SDHDO14521 159 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 KLF11O14901 512 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 HDAC3O15379 428 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 TSPAN2O60636 221 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 ABCB7O75027 752 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 IL12BP29460 328 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 PTGS2P35354 604 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 KRT20P35900 424 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 MASP1P48740 699 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 PER3P56645 1201 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 SLC10A1Q14973 349 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 MLC1Q15049 377 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 ZNHIT3Q15649 155 aaPredicted RBP13.92□□□□□ -0.18
ACTN1-217ENST00000556203 ARHGAP11AQ6P4F7 1023 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 LARP4Q71RC2 724 aaKnown RBP eCLIP13.92□□□□□ -0.18
ACTN1-217ENST00000556203 PACS2Q86VP3 889 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 WDR75Q8IWA0 830 aaKnown RBP13.92□□□□□ -0.18
ACTN1-217ENST00000556203 LRRC34Q8IZ02 419 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 ZNF75CPQ92670 426 aaPredicted RBP13.92□□□□□ -0.18
ACTN1-217ENST00000556203 EFHD2Q96C19 240 aaPredicted RBP13.92□□□□□ -0.18
ACTN1-217ENST00000556203 COQ8BQ96D53 544 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 TMCO6Q96DC7 493 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 PSMG3-AS1Q96PY0 264 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 LMF2Q9BU23 707 aaKnown RBP13.92□□□□□ -0.18
ACTN1-217ENST00000556203 OSBPL11Q9BXB4 747 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 Q9N2J8 555 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 EQTNQ9NQ60 294 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 KLRF1Q9NZS2 232 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 B4GALT7Q9UBV7 327 aa13.92□□□□□ -0.18
ACTN1-217ENST00000556203 PRAMEF25A6NGN4 478 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 TRPC5OSA6NMA1 111 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 SLCO1B7G3V0H7 640 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 PRRG2O14669 202 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 SASH3O75995 380 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 IGHG3P01860 377 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 GABRA3P34903 492 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 PTGDSP41222 190 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 C21orf58P58505 322 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 GAB1Q13480 694 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 EFR3AQ14156 821 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 PGS1Q32NB8 556 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 CYP27C1Q4G0S4 372 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 SLC30A6Q6NXT4 461 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 TMEM81Q6P7N7 255 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 TRILQ7L0X0 811 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 NATD1Q8N6N6 113 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 NUP43Q8NFH3 380 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 CEP70Q8NHQ1 597 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 FAM57AQ8TBR7 257 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 OR5P2Q8WZ92 322 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 TMEM41AQ96HV5 264 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 MS4A4EQ96PG1 132 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 DUSP26Q9BV47 211 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 DPY30Q9C005 99 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 LDAHQ9H6V9 325 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 WDR55Q9H6Y2 383 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-217ENST00000556203 C3orf14Q9HBI5 128 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 GALNT9Q9HCQ5 603 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 SIRT3Q9NTG7 399 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-217ENST00000556203 NTMQ9P121 344 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 SUCOQ9UBS9 1254 aaKnown RBP13.91□□□□□ -0.18
ACTN1-217ENST00000556203 CBLCQ9ULV8 474 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 SNX8Q9Y5X2 465 aa13.91□□□□□ -0.18
ACTN1-217ENST00000556203 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.9□□□□□ -0.18
ACTN1-217ENST00000556203 GOLGA8QA0A0J9YX86 632 aa13.9□□□□□ -0.18
ACTN1-217ENST00000556203 GOLGA8OA6NCC3 632 aa13.9□□□□□ -0.18
ACTN1-217ENST00000556203 C2orf72A6NCS6 295 aa13.9□□□□□ -0.18
ACTN1-217ENST00000556203 TTC36A6NLP5 189 aa13.9□□□□□ -0.18
ACTN1-217ENST00000556203 GOLGA8NF8WBI6 632 aa13.9□□□□□ -0.18
ACTN1-217ENST00000556203 GNB5O14775 395 aa13.9□□□□□ -0.18
ACTN1-217ENST00000556203 EMC8O43402 210 aa13.9□□□□□ -0.18
ACTN1-217ENST00000556203 ZG16O60844 167 aa13.9□□□□□ -0.18
ACTN1-217ENST00000556203 ICOSLGO75144 302 aa13.9□□□□□ -0.18
ACTN1-217ENST00000556203 C6orf47O95873 294 aa13.9□□□□□ -0.18
ACTN1-217ENST00000556203 TPOP07202 933 aa13.9□□□□□ -0.18
ACTN1-217ENST00000556203 ESRRAP11474 423 aaPredicted RBP13.9□□□□□ -0.18
ACTN1-217ENST00000556203 GDF1P27539 372 aa13.9□□□□□ -0.18
ACTN1-217ENST00000556203 SNTA1Q13424 505 aa13.9□□□□□ -0.18
ACTN1-217ENST00000556203 FNDC7Q5VTL7 733 aa13.9□□□□□ -0.18
ACTN1-217ENST00000556203 OGFOD2Q6N063 350 aa13.9□□□□□ -0.18
ACTN1-217ENST00000556203 ANGPTL8Q6UXH0 198 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms