RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 LASP1Q14847 261 aaKnown RBP7.76□□□□□ -1.17
ATXN3-235ENST00000556082 SYPL1Q16563 259 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 NDUFA9Q16795 377 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 FAM214AQ32MH5 1076 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 ZNF750Q32MQ0 723 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 CNPY1Q3B7I2 92 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 INAVAQ3KP66 663 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 C14orf28Q4W4Y0 310 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 ZNF628Q5EBL2 1059 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 RPS26P11Q5JNZ5 115 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-235ENST00000556082 COLEC12Q5KU26 742 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 ATAD3BQ5T9A4 648 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 FHL5Q5TD97 284 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 MLIPQ5VWP3 458 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 ZNF770Q6IQ21 691 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-235ENST00000556082 LAIR2Q6ISS4 152 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 TCTN3Q6NUS6 607 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 MFSD12Q6NUT3 480 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 CDC73Q6P1J9 531 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 TMEM107Q6UX40 140 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 KRTAP19-1Q8IUB9 90 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 CA13Q8N1Q1 262 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 SLC5A8Q8N695 610 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 SMYD1Q8NB12 490 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 OR10G2Q8NGC3 310 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 OR9A2Q8NGT5 310 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 ZCCHC10Q8TBK6 192 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 ADAMTS18Q8TE60 1221 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 HOXB13Q92826 284 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-235ENST00000556082 CTHRC1Q96CG8 243 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 C16orf58Q96GQ5 468 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 HSPA12BQ96MM6 686 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 COL21A1Q96P44 957 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 MS4A4EQ96PG1 132 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 OR7D2Q96RA2 312 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 CITED4Q96RK1 184 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 FEVQ99581 238 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 SLC38A3Q99624 504 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 CCDC3Q9BQI4 270 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 FUZQ9BT04 418 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 PINK1Q9BXM7 581 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 RSPO3Q9BXY4 272 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-235ENST00000556082 MTHFD2LQ9H903 347 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-235ENST00000556082 NMNAT1Q9HAN9 279 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-235ENST00000556082 ANKHQ9HCJ1 492 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 FAM60AQ9NP50 221 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 PAPOLBQ9NRJ5 636 aaKnown RBP7.76□□□□□ -1.17
ATXN3-235ENST00000556082 SEMA5BQ9P283 1151 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 SEC14L3Q9UDX4 400 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 PLCL2Q9UPR0 1127 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 POFUT2Q9Y2G5 429 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 MRPS2Q9Y399 296 aaKnown RBP7.76□□□□□ -1.17
ATXN3-235ENST00000556082 NAALAD2Q9Y3Q0 740 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 TESMINQ9Y4I5 508 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 CEPT1Q9Y6K0 416 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 COMMD3-BMI1R4GMX3 469 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 A0A1W2PRQ8 180 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 A0A1W2PS29 197 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 FITM1A5D6W6 292 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 TLCD2A6NGC4 264 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 FAAHO00519 579 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 BCAT2O15382 392 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-235ENST00000556082 ICMTO60725 284 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 DNAJB6O75190 326 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 PIAS2O75928 621 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 CCNB2O95067 398 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 GADD45GO95257 159 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 CPNE6O95741 557 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 DLGAP3O95886 979 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 CHRM4P08173 479 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 SLC35E2P0CK97 266 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 C8orf89P0DMQ9 161 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 TNFRSF1BP20333 461 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 MAOBP27338 520 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 ELK4P28324 431 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 PRKAR1BP31321 381 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 MAP3K8P41279 467 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 GPR3P46089 330 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 PRKAG1P54619 331 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 CDH12P55289 794 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 CDH15P55291 814 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 TPD52P55327 224 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-235ENST00000556082 C21orf59P57076 290 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 VSX2P58304 361 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-235ENST00000556082 PPP1CAP62136 330 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 RPP38P78345 283 aaKnown RBP7.75□□□□□ -1.17
ATXN3-235ENST00000556082 SIM1P81133 766 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-235ENST00000556082 SPIBQ01892 262 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 MGAT2Q10469 447 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 FUT5Q11128 374 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 MAP4K2Q12851 820 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 BIKQ13323 160 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 RAPSNQ13702 412 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 TUBA3CQ13748 450 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 DGCR6Q14129 220 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 NR1D2Q14995 579 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 MSMPQ1L6U9 139 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 EXOC3L2Q2M3D2 409 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 CTU2Q2VPK5 515 aaKnown RBP7.75□□□□□ -1.17
ATXN3-235ENST00000556082 ARHGAP11BQ3KRB8 267 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms