RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 GIMAP4Q9NUV9 329 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 ADPRHL2Q9NX46 363 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 TAS2R7Q9NYW3 318 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 DNAJB9Q9UBS3 223 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 TMEFF2Q9UIK5 374 aaPredicted RBP6.41□□□□□ -1.38
SLIRP-204ENST00000555890 BAG5Q9UL15 447 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 PSME2Q9UL46 239 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 FAF1Q9UNN5 650 aaPredicted RBP6.41□□□□□ -1.38
SLIRP-204ENST00000555890 ENTPD4Q9Y227 616 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 KLHL20Q9Y2M5 609 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 V9GYQ6 96 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 TP53BP1Q12888 1972 aaPredicted RBP6.4□□□□□ -1.38
SLIRP-204ENST00000555890 A0A0G2JN53 185 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 A0A0J9YVX5 310 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 TMEM247A6NEH6 219 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 OR5K3A6NET4 321 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 B4DGG1 531 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 F8W735 103 aaPredicted RBP6.4□□□□□ -1.38
SLIRP-204ENST00000555890 FLRT2O43155 660 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 TMPRSS11DO60235 418 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 RASAL1O95294 804 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 ZNF682O95780 498 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 CST1P01037 141 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 WNT1P04628 370 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 ZNF23P17027 643 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 CKMT2P17540 419 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 MAGP20916 626 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 PCGF2P35227 344 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 MAGEA8P43361 318 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 ANXA11P50995 505 aaKnown RBP6.4□□□□□ -1.38
SLIRP-204ENST00000555890 CLCN2P51788 898 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 ARHGDIAP52565 204 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 C21orf59P57076 290 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 RAB8AP61006 207 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 HNRNPKP61978 463 aaKnown RBP eCLIP6.4□□□□□ -1.38
SLIRP-204ENST00000555890 BTN3A2P78410 334 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 RUNX1T1Q06455 604 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 GAB1Q13480 694 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 MYBPC3Q14896 1274 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 NRF1Q16656 503 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 ZNF630Q2M218 657 aaPredicted RBP6.4□□□□□ -1.38
SLIRP-204ENST00000555890 MPEG1Q2M385 716 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 LRRC23Q53EV4 343 aaPredicted RBP6.4□□□□□ -1.38
SLIRP-204ENST00000555890 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.4□□□□□ -1.38
SLIRP-204ENST00000555890 NDUFAF5Q5TEU4 345 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 CDPF1Q6NVV7 123 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 FBXO42Q6P3S6 717 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 BHLHB9Q6PI77 547 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 ENPP6Q6UWR7 440 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 SPRED1Q7Z699 444 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 PTOV1Q86YD1 416 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 CCDC103Q8IW40 242 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 NAGSQ8N159 534 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 SVOPLQ8N434 492 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 CBR4Q8N4T8 237 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 OR8K5Q8NH50 307 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 FLVCR1-AS1Q8TAF5 88 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 LMX1AQ8TE12 382 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 PATE1Q8WXA2 126 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 FBXW5Q969U6 566 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 EXOSC8Q96B26 276 aaKnown RBP6.4□□□□□ -1.38
SLIRP-204ENST00000555890 MOAP1Q96BY2 351 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 TM4SF19Q96DZ7 209 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 HSPBAP1Q96EW2 488 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 ZNF597Q96LX8 424 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 TEFMQ96QE5 360 aaKnown RBP6.4□□□□□ -1.38
SLIRP-204ENST00000555890 BBS4Q96RK4 519 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 SERINC2Q96SA4 455 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 LRRC61Q9BV99 259 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 ABCG4Q9H172 646 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 UCK1Q9HA47 277 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 LHX9Q9NQ69 397 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 SLC35C2Q9NQQ7 365 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 GPATCH2Q9NW75 528 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 C14orf119Q9NWQ9 140 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 TEX10Q9NXF1 929 aaPredicted RBP6.4□□□□□ -1.38
SLIRP-204ENST00000555890 THUMPD1Q9NXG2 353 aaKnown RBP6.4□□□□□ -1.38
SLIRP-204ENST00000555890 SCOCQ9UIL1 159 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 PHF11Q9UIL8 331 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 UTS2RQ9UKP6 389 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 FBXW2Q9UKT8 454 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 PADI4Q9UM07 663 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 ASB4Q9Y574 426 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 KLK4Q9Y5K2 254 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 SNX8Q9Y5X2 465 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 AP4B1Q9Y6B7 739 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 SPACA6W5XKT8 324 aa6.4□□□□□ -1.38
SLIRP-204ENST00000555890 SCN3AQ9NY46 2000 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 A0A1B0GTW7 788 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 C5orf58C9J3I9 102 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 FAM47E-STBD1D6RA91 191 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 SOCS2O14508 198 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 ZSCAN9O15535 394 aaPredicted RBP6.39□□□□□ -1.39
SLIRP-204ENST00000555890 AQP9O43315 295 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 PROM1O43490 865 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 B3GALT2O43825 422 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 NOBOXO60393 691 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 PRSS23O95084 383 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 STATHP02808 62 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 CELA2BP08218 269 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms