RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 BAIAP2Q9UQB8 552 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 CA5BQ9Y2D0 317 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 STARD10Q9Y365 291 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 GOLT1BQ9Y3E0 138 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 PCDHB1Q9Y5F3 818 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 PCDHGA7Q9Y5G6 932 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 PCDHGA6Q9Y5G7 932 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 SF3B1O75533 1304 aaKnown RBP eCLIP4.16□□□□□ -1.744e-12■■■■■ 275.7
ATXN3-227ENST00000554491 ABCB11O95342 1321 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 RALGAPA1Q6GYQ0 2036 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 A0A075B6Q4 140 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 A0A0A6YYH2 397 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 C2orf92A0A1B0GVN3 265 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 MEIOCA2RUB1 952 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 CCDC182A6NF36 153 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 A6NJ64 397 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 PDZK1P1A8MUH7 402 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 TMEM189-UBE2V1I3L0A0 370 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 GTPBP1O00178 669 aaKnown RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 QSOX1O00391 747 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 SURF4O15260 269 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 COCHO43405 550 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 PMPCBO75439 489 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 UBXN7O94888 489 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 SEC24AO95486 1093 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 TSPAN12O95859 305 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 TOP3BO95985 862 aaKnown RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 PAK4O96013 591 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 F10P00742 488 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ENO1P06733 434 aaKnown RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 MMP3P08254 477 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 LINC00271P0C7V0 271 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 DHRS4L1P0CG22 281 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 CKMT1AP12532 417 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ZNF250P15622 560 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 DTYMKP23919 212 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 HSD11B1P28845 292 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 BDKRB2P30411 391 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 OR1E1P30953 314 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 PTGER1P34995 402 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 CA5AP35218 305 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 TGFBR2P37173 567 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 THPOP40225 353 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 MAGEB1P43366 347 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 SRP9P49458 86 aaKnown RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 CARSP49589 748 aaKnown RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 RGS6P49758 472 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 RBP2P50120 134 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 HLCSP50747 726 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ARSEP51690 589 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 KPNA2P52292 529 aaKnown RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 AGFG1P52594 562 aaKnown RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 AP3S2P59780 193 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ACTBP60709 375 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 CXCR4P61073 352 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ACTA2P62736 377 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 HERVK_113P63132 956 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ACTG1P63261 375 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ACTG2P63267 376 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ACTC1P68032 377 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ACTA1P68133 377 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 SHC2P98077 582 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 SEMG2Q02383 582 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 RGS1Q08116 209 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 RASGEF1BQ0VAM2 473 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ILKQ13418 452 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 CNN3Q15417 329 aaKnown RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 GRK1Q15835 563 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 USF2Q15853 346 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 SLC18A3Q16572 532 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 CALCRLQ16602 461 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 BAK1Q16611 211 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ZNF181Q2M3W8 571 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 KIF19Q2TAC6 998 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 BTBD16Q32M84 506 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 PCGF3Q3KNV8 242 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 UGT3A2Q3SY77 523 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ACTBL2Q562R1 376 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 PLAC9Q5JTB6 97 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 CLLU1Q5K131 121 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ARMC12Q5T9G4 340 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ATPAF1Q5TC12 328 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 OGFRL1Q5TC84 451 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 IRAK1BP1Q5VVH5 260 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 FAM199XQ6PEV8 388 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 TMPRSS11FQ6ZWK6 438 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 PGAP1Q75T13 922 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 APTXQ7Z2E3 356 aaKnown RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ADGRD2Q7Z7M1 963 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ADGRA1Q86SQ6 560 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 GALNT10Q86SR1 603 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 BIVMQ86UB2 503 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 SLC22A16Q86VW1 577 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 FBXO16Q8IX29 292 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ZNF679Q8IYX0 411 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 GCNT2Q8N0V5 402 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 STK40Q8N2I9 435 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 SUMF1Q8NBK3 374 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 MFSD9Q8NBP5 474 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms