RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 BST2Q10589 180 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 STX3Q13277 289 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 DRAP1Q14919 205 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 TPSAB1Q15661 275 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TSC22D1Q15714 1073 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CST6Q15828 149 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 RAB11BQ15907 218 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 SNAPC1Q16533 368 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CMPK2Q5EBM0 449 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 MS4A13Q5J8X5 152 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TCHHL1Q5QJ38 904 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 C6orf10Q5SRN2 563 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 HES3Q5TGS1 186 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 RAET1LQ5VY80 246 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PRMT9Q6P2P2 845 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 SPESP1Q6UW49 350 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 C5orf46Q6UWT4 87 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 USP43Q70EL4 1123 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ABI3BPQ7Z7G0 1075 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PRUNE1Q86TP1 453 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CDK20Q8IZL9 346 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 MMP21Q8N119 569 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 GUF1Q8N442 669 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 FAM89BQ8N5H3 189 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TRAM1L1Q8N609 369 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CSNK2A3Q8NEV1 391 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 OR13F1Q8NGS4 319 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 OR13C3Q8NGS6 347 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ACTL9Q8TC94 416 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 MAGEC3Q8TD91 643 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ACTRT1Q8TDG2 376 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 SETD7Q8WTS6 366 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 MAGOHBQ96A72 148 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 SLC25A36Q96CQ1 311 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 SLC7A6OSQ96CW6 309 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 REPS1Q96D71 796 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 C14orf79Q96F83 325 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 LIN37Q96GY3 246 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 LURAP1Q96LR2 239 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 KLHL15Q96M94 604 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 BTBD9Q96Q07 612 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TEFMQ96QE5 360 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 NPAS2Q99743 824 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CTRCQ99895 268 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 SSX3Q99909 188 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 DUSP23Q9BVJ7 150 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 BEX2Q9BXY8 128 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 HDAC8Q9BY41 377 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ANKRD60Q9BZ19 345 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PLK3Q9H4B4 646 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CAB39LQ9H9S4 337 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 FN3KRPQ9HA64 309 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 EBF2Q9HAK2 575 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 STARD5Q9NSY2 213 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 GID8Q9NWU2 228 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CTTNBP2NLQ9P2B4 639 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CNOT8Q9UFF9 292 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 OSGIN1Q9UJX0 560 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CLEC4EQ9ULY5 219 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ERVW-1Q9UQF0 538 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TMEM184BQ9Y519 407 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 OR51B4Q9Y5P0 310 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 LRRK1Q38SD2 2015 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 A0A1B0GV90 55 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 FAM90A18PA6NE21 464 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 FAM90A16PA6NEW6 464 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 FABP12A6NFH5 140 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 OOEPA6NGQ2 149 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 FAM90A9PA6NNJ1 464 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 PDZK1P1A8MUH7 402 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 FAM90A5PA8MXJ8 464 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 KCNU1A8MYU2 1149 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 CENPBD1B2RD01 187 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 C1QTNF3-AMACRE9PGA6 284 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 H0YIG0 161 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 CCDC188H7C350 402 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ZNF561-AS1K7EIQ3 104 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 MATN2O00339 956 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 NTN3O00634 580 aaPredicted RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 FBP2O00757 339 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 SCDO00767 359 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ANKRD28O15084 1053 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 HSPA12AO43301 675 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 SELENOFO60613 162 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 RNASEH1O60930 286 aaKnown RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 GATBO75879 557 aaKnown RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 WISP1O95388 367 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 SLC16A8O95907 504 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 RLN1P04808 185 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 SERPINA6P08185 405 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 FAM90A15PP0C7V4 464 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 FAM90A14PP0C7W9 464 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 SLC2A1P11166 492 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 PNLIPP16233 465 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 FSTP19883 344 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ACHEP22303 614 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 CCNOP22674 350 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 GLDCP23378 1020 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 MAOBP27338 520 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 MSX1P28360 303 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms