RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 C3orf30Q96M34 536 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 BTBD9Q96Q07 612 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 TIMP4Q99727 224 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 UGT2B28Q9BY64 529 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 LRTM1Q9HBL6 345 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 ACKR4Q9NPB9 350 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 KLRF1Q9NZS2 232 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 PKDREJQ9NTG1 2253 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 ADGRG4Q8IZF6 3080 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 GXYLT2A0PJZ3 443 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 FIGNL2A6NMB9 653 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 UPK1AO00322 258 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 PIP5K1BO14986 540 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 SNPHO15079 494 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 TO15178 435 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 TRIM13O60858 407 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 LYPLA1O75608 230 aaPredicted RBP16.61■□□□□ 0.25
SHMT2-206ENST00000553529 HPNP05981 417 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 CHRNB4P30926 498 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 STARP49675 285 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 TMED10P49755 219 aaKnown RBP16.61■□□□□ 0.25
SHMT2-206ENST00000553529 IFFO1Q0D2I5 559 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 HSPB3Q12988 150 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 TIGD3Q6B0B8 471 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 TMEM211Q6ICI0 200 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 PACS2Q86VP3 889 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 HSPBAP1Q96EW2 488 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 AMDHD1Q96NU7 426 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 ENKD1Q9H0I2 346 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 MIEF1Q9NQG6 463 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 MKS1Q9NXB0 559 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 SENP1Q9P0U3 644 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 PRODH2Q9UF12 536 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 PDZD2O15018 2839 aa16.61■□□□□ 0.25
SHMT2-206ENST00000553529 DCHS2Q6V1P9 2916 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 CAPN14A8MX76 684 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 LSM1O15116 133 aaKnown RBP16.6■□□□□ 0.25
SHMT2-206ENST00000553529 SCO2O43819 266 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 SLU7O95391 586 aaKnown RBP16.6■□□□□ 0.25
SHMT2-206ENST00000553529 IGKV1D-16P01601 117 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 CYP4B1P13584 511 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 IGFBP2P18065 325 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 RFX3P48380 749 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 GAS1P54826 345 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 DLX5P56178 289 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 ACSF3Q4G176 576 aaPredicted RBP16.6■□□□□ 0.25
SHMT2-206ENST00000553529 NUP54Q7Z3B4 507 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 LSRQ86X29 649 aaPredicted RBP16.6■□□□□ 0.25
SHMT2-206ENST00000553529 DDIASQ8IXT1 998 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 RELL2Q8NC24 303 aaPredicted RBP16.6■□□□□ 0.25
SHMT2-206ENST00000553529 OR1J4Q8NGS1 313 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 TWIST2Q8WVJ9 160 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 LURAP1Q96LR2 239 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 COL21A1Q96P44 957 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 PARD6BQ9BYG5 372 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 PPCSQ9HAB8 311 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 EQTNQ9NQ60 294 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 RRAGDQ9NQL2 400 aaPredicted RBP16.6■□□□□ 0.25
SHMT2-206ENST00000553529 GIMAP4Q9NUV9 329 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 C1orf109Q9NX04 203 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 B4GALT7Q9UBV7 327 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 CAMK2AQ9UQM7 478 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 LRBAP50851 2863 aa16.6■□□□□ 0.25
SHMT2-206ENST00000553529 APCP25054 2843 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 WDR91A4D1P6 747 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 CCDC151A5D8V7 595 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 ITM2AO43736 263 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 GMFGO60234 142 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 PLOD3O60568 738 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 SKAP2O75563 359 aaPredicted RBP16.59■□□□□ 0.25
SHMT2-206ENST00000553529 SNX4O95219 450 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 MSX1P28360 303 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 ZNF844Q08AG5 666 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 TBCELQ5QJ74 424 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 LARP4Q71RC2 724 aaKnown RBP eCLIP16.59■□□□□ 0.25
SHMT2-206ENST00000553529 GDF7Q7Z4P5 450 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 EXOC3L1Q86VI1 746 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 OR5M1Q8NGP8 315 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 PIK3R3Q92569 461 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 NRGNQ92686 78 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 CAVIN3Q969G5 261 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 SLC35A4Q96G79 324 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 WDYHV1Q96HA8 205 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 FCRL1Q96LA6 429 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 SECISBP2Q96T21 854 aaKnown RBP16.59■□□□□ 0.25
SHMT2-206ENST00000553529 KLHDC3Q9BQ90 382 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 C1orf50Q9BV19 199 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 ZDHHC2Q9UIJ5 367 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 CFL2Q9Y281 166 aa16.59■□□□□ 0.25
SHMT2-206ENST00000553529 RPH3AQ9Y2J0 694 aaPredicted RBP16.59■□□□□ 0.25
SHMT2-206ENST00000553529 NPIPB8E9PQR5 432 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 ACOX3O15254 700 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 TYROBPO43914 113 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 WDR1O75083 606 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 PSMG1O95456 288 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 PRPH2P23942 346 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 PTGER4P35408 488 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 RNF144AP50876 292 aaPredicted RBP16.58■□□□□ 0.24
SHMT2-206ENST00000553529 SRYQ05066 204 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 STX5Q13190 355 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms