RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 PCNPQ8WW12 178 aaKnown RBP3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 PIGCQ92535 297 aa3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 ART4Q93070 314 aa3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 LHX4Q969G2 390 aa3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 FBXO32Q969P5 355 aa3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 DHTKD1Q96HY7 919 aaPredicted RBP3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 GMPPAQ96IJ6 420 aaPredicted RBP3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 AKR1E2Q96JD6 320 aa3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 ANKRD27Q96NW4 1050 aa3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 USP28Q96RU2 1077 aa3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 C19orf43Q9BQ61 176 aa3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 ST6GALNAC5Q9BVH7 336 aa3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 CRNKL1Q9BZJ0 848 aaKnown RBP3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 SLC25A51Q9H1U9 297 aa3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 MED20Q9H944 212 aa3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 KCNK13Q9HB14 408 aa3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 IL1RL2Q9HB29 575 aa3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 POLD4Q9HCU8 107 aa3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 NLGN3Q9NZ94 848 aa3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 PIPOXQ9P0Z9 390 aa3.4□□□□□ -1.87
LSM6P2-201ENST00000552208 METP08581 1390 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 TRAV26-1A0A087WT03 109 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 A0A087X002 238 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 A0A0J9YVX5 310 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 MFSD2BA6NFX1 497 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 MPTX1A8MV57 137 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 ERVV-2B6SEH9 535 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 PRRG1O14668 218 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 KLHL41O60662 606 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 MAGEC1O60732 1142 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 CLDN1O95832 211 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 ADORA3P0DMS8 318 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 SNHG28P0DPA3 235 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 XRCC1P18887 633 aaPredicted RBP3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 GRIA1P42261 906 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 PLA2G16P53816 162 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 ACTR3P61158 418 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 NOP14P78316 857 aaKnown RBP3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 PHEXP78562 749 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 ELAVL3Q14576 367 aaKnown RBP3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 EMC2Q15006 297 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 FAM189A2Q15884 450 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 UPP1Q16831 310 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 EXOC3L2Q2M3D2 409 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 GGTA1PQ4G0N0 100 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 KCTD21Q4G0X4 260 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 TMEM52BQ4KMG9 183 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 BEND6Q5SZJ8 279 aaPredicted RBP3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 CELF3Q5SZQ8 465 aaKnown RBP3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 PNCKQ6P2M8 343 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 BTNL3Q6UXE8 466 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 MOB2Q70IA6 237 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 TAS2R42Q7RTR8 314 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 LUZP1Q86V48 1076 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 SLC22A9Q8IVM8 553 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 VSTM4Q8IW00 320 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 LRRC43Q8N309 656 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 SYT14Q8NB59 555 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 ZNF671Q8TAW3 534 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 CTNNBL1Q8WYA6 563 aaPredicted RBP3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 NABP1Q96AH0 204 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 DOCK7Q96N67 2140 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 RCHY1Q96PM5 261 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 NPY6RQ99463 290 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 TTYH2Q9BSA4 534 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 FEM1AQ9BSK4 669 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 WACQ9BTA9 647 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 TMEM43Q9BTV4 400 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 TRIM9Q9C026 710 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 COMMD4Q9H0A8 199 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 NT5DC2Q9H857 520 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 WDR41Q9HAD4 459 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 DCAF13Q9NV06 445 aaKnown RBP3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 EIF3LQ9Y262 564 aaKnown RBP3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 DHRS7Q9Y394 339 aa3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 EXOSC1Q9Y3B2 195 aaKnown RBP3.39□□□□□ -1.87
LSM6P2-201ENST00000552208 SMCHD1A6NHR9 2005 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 MEIOCA2RUB1 952 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 CTAGE15A4D2H0 777 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 METTL21EPA6NDL7 271 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 ZNF716A6NP11 495 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 TMCO5BA8MYB1 307 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 K7EQG2 157 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 SGK1O00141 431 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 ZNF264O43296 627 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 ZNF208O43345 1280 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 EFNA2O43921 213 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 FCMRO60667 390 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 DUSP11O75319 330 aaKnown RBP3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 IGLV2-11P01706 119 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 IGHG1P01857 330 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 ZNF735P0CB33 412 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 TBXA2RP21731 343 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 PCMT1P22061 227 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 UCP1P25874 307 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 PDHA2P29803 388 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 CHRNB4P30926 498 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 CEBPDP49716 269 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms